CF832579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21 Identity = 52/141 (36.88%), Postives = 78/141 (55.32%), Query Frame = -1 Query: 327 ILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRN 707 ++ ELK LQ++P V E D+++W+ I GPP++ Y GG F I FP DYP+ PP F TK++HPNI NG +C+ IL E+W+P + +LLS+ SLL +PN P + + M++ R+ Sbjct: 13 LMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRD 153
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21 Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = -1 Query: 285 RILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 710 R+ +E K +KD P A P ++ + + I G +P+ GG+F + + F DYP PPK F +FHPN+ +G++CL IL+E W PA+TI ++LL I LL +PN DP E ++ DR +YE R+ +K++ Sbjct: 8 RLAQERKAWRKDHPLGLVAVPTKNPDGTMNLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRVRAQAKKFS 156
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC84_DROME (Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophila melanogaster GN=Ubc84D PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21 Identity = 48/144 (33.33%), Postives = 82/144 (56.94%), Query Frame = -1 Query: 285 RILKELKDL-QKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 710 R+ +EL DL + T + E + W ++ P +PY G F + I+FPP YPF PPK+ F+TK++HPN++ G +CL I+ + W P +VL ++ +++ +P P+ PL ++A + + K+ TA +T+K A Sbjct: 6 RLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLV-PEKAPYNKGAFRIEINFPPQYPFMPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREHKKFMKTAEEFTKKNA 148
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21 Identity = 51/137 (37.23%), Postives = 75/137 (54.74%), Query Frame = -1 Query: 339 ILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 707 +L ELK LQ++P V E D+++W+ I GPP++ Y GG F + FP DYP+ PP F TK++HPNI G +C+ IL E+W+P + +LLS+ SLL +PN P + + MY+ Sbjct: 13 LLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYR 149
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21 Identity = 51/137 (37.23%), Postives = 75/137 (54.74%), Query Frame = -1 Query: 339 ILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 707 +L ELK LQ++P V E D+++W+ I GPP++ Y GG F + FP DYP+ PP F TK++HPNI G +C+ IL E+W+P + +LLS+ SLL +PN P + + MY+ Sbjct: 13 LLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYR 149
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21 Identity = 51/149 (34.23%), Postives = 83/149 (55.70%), Query Frame = -1 Query: 285 RILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 710 R+ +E K +KD P A PV + D+ W+A I G + +AGGV+ +T+ +P +YP KPPKV F +HPN+ +G+ICL IL E W PA+T+ +++L + LL PNP+ P + ++ +Y+ ++Y+ Sbjct: 8 RLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYS 156
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.410e-21 Identity = 48/131 (36.64%), Postives = 76/131 (58.02%), Query Frame = -1 Query: 339 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-----KEQ---WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 707 ++ E + L ++P + +M W + GP D+ Y GG+F I FPP+YP++PP++ F ++++HPNI S+G +C+ IL +EQ WSP I +LLS+ SLL +PN D P + A Y+ Sbjct: 6 LMAEYRHLTENPSENFKVSVNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGMTWSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYR 136
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 51/149 (34.23%), Postives = 82/149 (55.03%), Query Frame = -1 Query: 285 RILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 710 R+ +E K +KD P A PV ++F+W+ I G D+ + GG++ + + F D+P PPK F +FHPN+ +G++CL +L E W P+++I ++L+ I LL PN +DP E +Y +R +YE + KYA Sbjct: 8 RLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = -1 Query: 339 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 710 R+ +EL L SA P ++++F W TI G + Y + +++ FP YP+ P V F T +HPN+++ G+ICLDILKE+WS + +LLSI SLL +PN D PL A ++K Sbjct: 34 RLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWK 157
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 50/137 (36.50%), Postives = 75/137 (54.74%), Query Frame = -1 Query: 285 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 689 D+ K + V +D+ + T GP DS Y GGV+ + + P YP+K P V F K++HPN++ S+G++CLD++ + WSP + V S + LL PNP DP E A + DR YE + + +KYA Sbjct: 11 DMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYA 147 The following BLAST results are available for this feature:
BLAST of CF832579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832579 ID=CF832579; Name=CF832579; organism=Citrus sinensis; type=EST; length=710bpback to top |