CF832579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 50/148 (33.78%), Postives = 81/148 (54.73%), Query Frame = -1 Query: 288 RILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKY 710 R+ +E K+ ++D P A P +++ W I G + + GGV+ + + F DYP KPPK F FHPN+ +G++CL IL E+ W P++TI VLL I LL +PNP P H++ T++ +Y+ ++ ++ Y Sbjct: 8 RLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVY 155
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = -1 Query: 285 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 689 DL K + + + M + GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL E A + DR YE + + +KYA Sbjct: 11 DLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYA 147
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = -1 Query: 285 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 689 D+ K + + + M + GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL E A + DR YE + + +KYA Sbjct: 11 DMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYA 147
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 50/126 (39.68%), Postives = 72/126 (57.14%), Query Frame = -1 Query: 285 IMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVA---------------FRTKVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 614 I GP +PYAGG F + + P YPF+PPKV F T+++HPNI+S G+ICLDILK++W+ +LT+ VLLS+ ++L P P DP +A + + + TA WT +A Sbjct: 57 IKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFA 182
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = -1 Query: 306 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTAR 710 R+ K++ +L S S +D+ +++ +I P D Y G F+ T P YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ V+ + L T+PN +DPL + A + + + +ET R Sbjct: 34 RLHKDISELNLPSSCSISFPNGKDDLMNFEVSIK-PDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVR 167
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBE2S_DICDI (Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum GN=ube2s PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20 Identity = 48/142 (33.80%), Postives = 78/142 (54.93%), Query Frame = -1 Query: 285 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 710 R++KELK+L + P ED+ + +A + GP +PY GG F + D+P PPK F TK+FHPN++ G IC++ LK+ W+ L + +LL+I LL PN + L + + + + + Y A+ +T +A Sbjct: 13 RVVKELKELNSSTLEGITLLPCEEDITNIEAVVTGPAGTPYEGGYFKARLILSSDFPRSPPKANFITKIFHPNVSKKGEICVNTLKKDWTEDLGLKHILLTIKCLLIVPNAESSLNEDASRLLLENYDDYCKHAKLFTSIHA 154
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20 Identity = 47/122 (38.52%), Postives = 71/122 (58.20%), Query Frame = -1 Query: 285 VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 647 V E++F W+ I GP +S Y F + I DYP+ PKV F T + H N+N G ICL+ILK+ W+ +L I ++ SI LL PNP+DP E+A +Y+ D+ Y+ R + + ++ Sbjct: 32 VDENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIRDYCKTHS 153
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19 Identity = 48/135 (35.56%), Postives = 74/135 (54.81%), Query Frame = -1 Query: 306 LKELKDLQK-DPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTAR 704 L+ KD+ + + PT C+ D+ ++ +I P D Y F TI+ P YP+ PPKV T V+HPNI+ G +CL+IL++ W P L I V+ + +L +PNPDDPL + A + ++ +E R Sbjct: 80 LRAQKDIDEMEVPTGCAVSFKDTNDILNFNLSIT-PTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVR 213
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = -1 Query: 285 VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 647 + + M + +GP D+PY GV+ + + P +YP+K P + F K+FHPNI+ ++GSICLD++ WSP + ++ I LL +PN DPL E A + D+ YE + + KYA Sbjct: 25 INDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYA 147
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 46/137 (33.58%), Postives = 73/137 (53.28%), Query Frame = -1 Query: 285 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYA 689 DL K + + + M + GP DS Y GGV+ V + YP+K P + F K++HPN++ +GS+CLD++ + WSP + + + + LL PNP DPL E A + D+N YE + + ++YA Sbjct: 11 DLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERYA 147 The following BLAST results are available for this feature:
BLAST of CF832579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832579 ID=CF832579; Name=CF832579; organism=Citrus sinensis; type=EST; length=710bpback to top |