CF832588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832588 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 48/154 (31.17%), Postives = 72/154 (46.75%), Query Frame = -2 Query: 225 CYIRQVSPASSDXXXXXXXXXXXXXXXXXXP---IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNVAVRNRIGFFPTFCGKFGIQPGDNLDC 677 CYI +++ A+ D +Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM N+V+ G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 153 CYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CF832588 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.481e-17 Identity = 47/155 (30.32%), Postives = 79/155 (50.97%), Query Frame = -2 Query: 225 YCYIRQVSPASSDXXXXXXXXXXXXXXXXXXP---IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNVAVRNRIGFFPTFCGKFGIQPGDNLDC 680 +CYI +++ AS D IQL+WN NY CG++L ++LL P+L++++P ++F++ +WFWM + P ++++ G+G T IN G+EC + AV RI ++ +CG+ G+ PG NL C Sbjct: 136 FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of CF832588 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 45/154 (29.22%), Postives = 73/154 (47.40%), Query Frame = -2 Query: 225 YCYIRQVSPASS--DXXXXXXXXXXXXXXXXXXPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNVAVRNRIGFFPTFCGKFGIQPGDNLDC 680 +CYI +++ +++ D P+Q++WN NY G A+G D L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG + R+G++ +C + G+ PG NL C Sbjct: 137 FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CF832588 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14 Identity = 46/156 (29.49%), Postives = 69/156 (44.23%), Query Frame = -2 Query: 225 YCYIRQVSPASSDXXXXXXXXXXXXXXXXXXP----IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNVAVRNRIGFFPTFCGKFGIQPGDNLDC 680 +CYI ++ AS D IQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++ +C + G+ GDNL C Sbjct: 136 FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of CF832588 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14 Identity = 42/154 (27.27%), Postives = 72/154 (46.75%), Query Frame = -2 Query: 225 YCYIRQVSPASS--DXXXXXXXXXXXXXXXXXXPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNVAVRNRIGFFPTFCGKFGIQPGDNLDC 680 +CYI +++ +++ D P+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM N+V+ G+G T ING +EC + R+G++ +C + + PG NL C Sbjct: 148 FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CF832588 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = -2 Query: 321 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 458 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CF832588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832588 ID=CF832588; Name=CF832588; organism=Citrus sinensis; type=EST; length=696bpback to top |