CF832589
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.118e-40 Identity = 76/154 (49.35%), Postives = 102/154 (66.23%), Query Frame = 1 Query: 178 SREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLP--GQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 633 + MFE +LP RN+ CP +GFYTYDA+ A + +PGFG +G++ RKRE+AAFFAQT ET+G + WGYC + +++P +SD P YYGRGP+QL WN NY CG LG +LL+ P+ +ATDPVLSF++A+WFWM Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNP-NSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWM 220
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.248e-40 Identity = 79/160 (49.38%), Postives = 108/160 (67.50%), Query Frame = 1 Query: 163 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 636 + +++ + FE +LP+R+DA CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF AQT H T+ GG Y+WGYCY ++V A+SD PG+ Y+ RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMT Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMT 248
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.248e-40 Identity = 79/160 (49.38%), Postives = 108/160 (67.50%), Query Frame = 1 Query: 163 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 636 + +++ + FE +LP+R+DA CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF AQT H T+ GG Y+WGYCY ++V A+SD PG+ Y+ RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMT Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMT 248
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.279e-36 Identity = 74/158 (46.84%), Postives = 93/158 (58.86%), Query Frame = 1 Query: 163 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 636 L II MF+D+L YRND +CPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF QT HET G W A G +Y WGYC++ N NY CG+ L + LL P+L+ TDP ++FK+A+WFWMT Sbjct: 85 LSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM---------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMT 209
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.374e-35 Identity = 75/158 (47.47%), Postives = 99/158 (62.66%), Query Frame = 1 Query: 163 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 636 + +IS +FE +L +R GFYTYDAFI AA++FP F +G+ +RKRE+AAF AQT HETTGGW AP G Y G ++SD Y+GRGPIQ+++N NY G+A+GVDLL NPDL+ +D + FK+A+WFWMT Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------STSD-------------YFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMT 128
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 3.261e-32 Identity = 65/156 (41.67%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 172 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYG-RGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 636 +++ +F+ + +R D CP++GFY+Y +F+ AA++FP FG G+ RKRE+AAF A T+G +D +AWG C+I + +D G+ Y RGPIQLT N NY G+A+G DL+ NPDL+ DP++SFK+A+WFWM+ Sbjct: 133 VVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMS 285
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.047e-26 Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = 1 Query: 172 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 633 I+++E F D + + A CP + FYT F+EA A+PGFG + RKREIAA+FA HET +A YC Q P + + +Y+GRGP+QL+WN NY+ G+ L D LN+PD++ DP++SFK+++WFW+ Sbjct: 49 IVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYPCNPNK-----------EYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.047e-26 Identity = 62/159 (38.99%), Postives = 88/159 (55.35%), Query Frame = 1 Query: 163 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS---DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFW 630 + I++ E F L+ +D C A+GFYT DAF+ AA +P FG +G+ KREIAAFFA HET +CYI ++ S D YYGRGP+Q++WN NY G+++G D L +PD +A PVL+F++A+W+W Sbjct: 68 VASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.956e-25 Identity = 67/160 (41.88%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 172 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQ----VSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 636 I+S+ F+ ++ + A CP + FYT AF+ A P FGN G+ KREIAAFFA HETT C+I + V A D G+ YYGRGP+QL+WN NY G+A+G D L NP+ +ATD SFK+A+WFWMT Sbjct: 90 IVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 1.916e-24 Identity = 59/160 (36.88%), Postives = 90/160 (56.25%), Query Frame = 1 Query: 163 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 633 +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA HET +CYI +++ AS D PG+ Y+GRGPIQL+WN NY CG++L ++LL P+L++++P ++F++ +WFWM Sbjct: 72 VGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWM 213 The following BLAST results are available for this feature:
BLAST of CF832589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832589 ID=CF832589; Name=CF832589; organism=Citrus sinensis; type=EST; length=636bpback to top |