CF832598

Overview
NameCF832598
Unique NameCF832598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.415e-16
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = -1
Query:  569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850
            +R +A     P+     P+ AIP A+  AGL  + ID +EINEAF+  A+   + LG+  E+VN  GGA++LGHPLGC+GAR +VTLL  L+ +
Sbjct:  304 LRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.415e-16
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = -1
Query:  569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850
            +R +A     P+     P+ AIP A+  AGL  + ID +EINEAF+  A+   + LG+  E+VN  GGA++LGHPLGC+GAR +VTLL  L+ +
Sbjct:  304 LRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THL_BACSU (Acetyl-CoA acetyltransferase OS=Bacillus subtilis GN=mmgA PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = -1
Query:  569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850
            I GF+           AP  AI K +   GL    ID +E+NEAF+ V +  +K++G D E+VN +GGA++LGHP+G SGARIL+TL+  L+ +
Sbjct:  276 ILGFSTTGMPAHELAAAPGFAINKLLKKNGLTVQDIDLFEVNEAFASVVLTCEKIVGFDLEKVNVNGGAIALGHPIGASGARILMTLVYELKRR 369          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = -1
Query:  569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850
            +R +A     P+     P+ AIP A+  AGL  S +D +EINEAF+  A    + L L PE+VN  GGAV+LGHPLGC+GAR ++TLL  L+ +
Sbjct:  304 LRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR 397          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = -1
Query:  569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850
            +R +A     P+     P+ AIP A+  AGL  + ID +EINEAF+  A+   + LG+  E+VN  GGA++LGHPLGC+GAR +VTLL  L+ +
Sbjct:  304 LRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = -1
Query:  569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850
            +R +A     P+     P+ AIP A+  AGL  + ID +EINEAF+  A+   + LG+  E+VN  GGA++LGHPLGC+GAR +VTLL  L+ +
Sbjct:  304 LRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = -1
Query:  569 RGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 847
            R FA     P      P++AIP A+  AGLE   ID +EINEAF+   +  +  LGLDPE++N +GGA+++GHPLG +GAR + TLL  ++ +
Sbjct:  321 RTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRR 413          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.025e-16
Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = -1
Query:  569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF---SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850
            IR  A A   P      P  A  KA+  AGL+   ID++E+NEAF   S+  + + KLLG+  E+VN +GGA++LGHPLGCSGARI  TLL +++ K
Sbjct:  271 IRSMAVAGCDPAIMGYGPVPATKKALKRAGLKVEDIDFWELNEAFAGQSLPVLKDLKLLGVMEEKVNLNGGAIALGHPLGCSGARISTTLLNIMQAK 367          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIC_HUMAN (Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.198e-15
Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = -1
Query:  578 PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 820
            P      P  AI +A+  AG     +D +EINEAF+ V+ A  K LGL+PE+VN  GGA++LGHPLG SG RILVTLL  L
Sbjct:  290 PSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTL 370          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.198e-15
Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = -1
Query:  569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF---SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850
            IR  A A   P      P  A  KA+  AGL+   ID++E+NEAF   S+  I + KL+G+  ++VN +GGA++LGHPLGCSGARI  TLL V+  K
Sbjct:  271 IRSMATAGCDPAIMGYGPVPATKKALKRAGLKVEDIDFWELNEAFAAQSLPVIKDLKLMGVVDQKVNLNGGAIALGHPLGCSGARISTTLLNVMAAK 367          
The following BLAST results are available for this feature:
BLAST of CF832598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
THIKB_MOUSE2.415e-1645.743-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musc... [more]
THIKA_MOUSE2.415e-1645.743-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musc... [more]
THL_BACSU3.154e-1643.62Acetyl-CoA acetyltransferase OS=Bacillus subtilis ... [more]
THIK_HUMAN3.154e-1646.813-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]
THIKB_RAT3.154e-1645.743-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]
THIKA_RAT3.154e-1645.743-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus n... [more]
THIK2_ARATH3.154e-1645.163-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidop... [more]
FADA_MARAV7.025e-1647.423-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei ... [more]
THIC_HUMAN1.198e-1553.09Acetyl-CoA acetyltransferase, cytosolic OS=Homo sa... [more]
FADA_HAHCH1.198e-1547.423-ketoacyl-CoA thiolase OS=Hahella chejuensis (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832598 ID=CF832598; Name=CF832598; organism=Citrus sinensis; type=EST; length=850bp
CCTTTTTTTTTTTTTTTTGACCACACAAAAGGCCATATAAAGGTGTTTCA
CTGGATTTGCTCTGACAGCAGCACAAGTCTAACAACATACCAATATTGCT
TGCTACAGTCAGCCAAGCGTCATTCACATAAGATCAAGTCATAAGAGAAG
CAGTGGTCTTATTTTAGTGATCTTCACTCTTCACATATTTCTCTAGCTCA
AGCTATATGATGAGCTACAGGGATTGGTGCTCCTTCGCCACCAATGCTTT
ACCACTTTACAATGGTATGATGACTTATGCGGGTAATCATTTAATACATC
TATCCTATCTACCTTTCTTACTAGGGTCGATCAAGCTGATACATTTCCCT
TTTTATTTATTTTTTTTCTCTTTTAGCTTTCTCATTCAAGTAGACAACTT
AACAAAGAGATAAGAGACAATAGCACAGGAGGTGATGTTCCACAGTCAGT
ATACATCATCAATTCATAGCTTGGAATGTCCCACCCGCACCGCTTGCATG
AGCTCAAGAACAAGAGCGGATGCCCCCCCTCCACCATTGCAGATGCCACC
AACGCCGTACTTCCCCTTCTTATGTCTCAGTACCCCCAATAATGTGACTA
AGATACGAGCTCCACTACACCCTAACGGATGACCCAGGGATACGGCTCCA
CCATGCGCATTAACCTGTTCAGGATCAAGACCAAGCAGTTTTTGATTGGC
AATAGCTACAACAGAAAAAGCTTCGTTTATTTCATAGTAATCAATCTGAG
AAGCTTCCAAGCCAGCATTTGCTATGGCTTTTGGTATTGCAAGGGATGGA
GCAGTTGTAAACCACTCTGGAGCCTGAGCTGCGTCAGCAAATCCCCTAAT
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