CF832598

Overview
NameCF832598
Unique NameCF832598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.670e-15
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = -1
Query:  569 RGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 847
            R F+     P      P++AIP A+  AGLE + +D +EINEAF+   +  +  LGLD E++N +GGA+++GHPLG +GAR + TLL  ++ +
Sbjct:  313 RTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEINEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRR 405          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: ATOB_ECOLI (Acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=atoB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.554e-15
Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = -1
Query:  575 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 850
            I+ +A     P      P  A  KA+  AGL+ + ID  E NEAF+   +A  K LG D E+VN +GGA++LGHP+G SGARILVTLL  ++
Sbjct:  276 IKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQ 367          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = -1
Query:  569 RGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 847
            R FA     P      P++AIP A   AGL  S ID +EINEAF+   + + K L LD E+VN +GGA+++GHPLG +GAR + TLL  ++ +
Sbjct:  322 RSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRR 414          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.767e-15
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = -1
Query:  569 RGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 847
            R FA     PE     P  AIP+A+  AGL+   I  +E+NEAF+  AI   + LG+D E+VN +GGA++LGHPLGC+G ++ ++L+  ++ +
Sbjct:  275 RSFAVGGVPPEVMGIGPVEAIPRALKLAGLQLQDIGLFELNEAFASQAIQVIRELGIDEEKVNVNGGAIALGHPLGCTGTKLTLSLIHEMKRR 367          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THLA_STAAW (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MW2) GN=MW0330 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-14
Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = -1
Query:  587 GFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 844
            GF      P     AP  A+ KA+  +  E S ID +E+NEAF+  ++A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  278 GFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THLA_STAAS (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0330 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-14
Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = -1
Query:  587 GFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 844
            GF      P     AP  A+ KA+  +  E S ID +E+NEAF+  ++A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  278 GFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THLA_STAAC (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain COL) GN=SACOL0426 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-14
Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = -1
Query:  587 GFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 844
            GF      P     AP  A+ KA+  +  E S ID +E+NEAF+  ++A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  278 GFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THLA_STAAB (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0304 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-14
Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = -1
Query:  587 GFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 844
            GF      P     AP  A+ KA+  +  E S ID +E+NEAF+  ++A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  278 GFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THLA_STAA8 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00336 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-14
Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = -1
Query:  587 GFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 844
            GF      P     AP  A+ KA+  +  E S ID +E+NEAF+  ++A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  278 GFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THLA_STAA3 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0355 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-14
Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = -1
Query:  587 GFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 844
            GF      P     AP  A+ KA+  +  E S ID +E+NEAF+  ++A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  278 GFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363          
The following BLAST results are available for this feature:
BLAST of CF832598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
THIK1_ARATH2.670e-1541.943-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidop... [more]
ATOB_ECOLI4.554e-1546.74Acetyl-CoA acetyltransferase OS=Escherichia coli (... [more]
THIK5_ARATH5.947e-1545.163-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidop... [more]
FADA_BACSU7.767e-1541.943-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fa... [more]
THLA_STAAW1.014e-1447.67Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAS1.014e-1447.67Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAC1.014e-1447.67Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAB1.014e-1447.67Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA81.014e-1447.67Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA31.014e-1447.67Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832598 ID=CF832598; Name=CF832598; organism=Citrus sinensis; type=EST; length=850bp
CCTTTTTTTTTTTTTTTTGACCACACAAAAGGCCATATAAAGGTGTTTCA
CTGGATTTGCTCTGACAGCAGCACAAGTCTAACAACATACCAATATTGCT
TGCTACAGTCAGCCAAGCGTCATTCACATAAGATCAAGTCATAAGAGAAG
CAGTGGTCTTATTTTAGTGATCTTCACTCTTCACATATTTCTCTAGCTCA
AGCTATATGATGAGCTACAGGGATTGGTGCTCCTTCGCCACCAATGCTTT
ACCACTTTACAATGGTATGATGACTTATGCGGGTAATCATTTAATACATC
TATCCTATCTACCTTTCTTACTAGGGTCGATCAAGCTGATACATTTCCCT
TTTTATTTATTTTTTTTCTCTTTTAGCTTTCTCATTCAAGTAGACAACTT
AACAAAGAGATAAGAGACAATAGCACAGGAGGTGATGTTCCACAGTCAGT
ATACATCATCAATTCATAGCTTGGAATGTCCCACCCGCACCGCTTGCATG
AGCTCAAGAACAAGAGCGGATGCCCCCCCTCCACCATTGCAGATGCCACC
AACGCCGTACTTCCCCTTCTTATGTCTCAGTACCCCCAATAATGTGACTA
AGATACGAGCTCCACTACACCCTAACGGATGACCCAGGGATACGGCTCCA
CCATGCGCATTAACCTGTTCAGGATCAAGACCAAGCAGTTTTTGATTGGC
AATAGCTACAACAGAAAAAGCTTCGTTTATTTCATAGTAATCAATCTGAG
AAGCTTCCAAGCCAGCATTTGCTATGGCTTTTGGTATTGCAAGGGATGGA
GCAGTTGTAAACCACTCTGGAGCCTGAGCTGCGTCAGCAAATCCCCTAAT
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