CF832598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_PSEMY (3-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (strain ymp) GN=fadA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 43/95 (45.26%), Postives = 57/95 (60.00%), Query Frame = -1 Query: 575 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIA---NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 850 +R A A P P + KA+ AGL + ID+ E+NEAF+ A+ + KLL E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 271 VRAMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFVELNEAFAAQALPVLKDLKLLDKMEEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_PSEAE (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa GN=fadA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = -1 Query: 575 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIA---NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 850 IR A A P P + KA+ AGL + ID+ E+NEAF+ A+ + KLL E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 271 IRSMAVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQALPVLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_PSEAB (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = -1 Query: 575 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIA---NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 850 IR A A P P + KA+ AGL + ID+ E+NEAF+ A+ + KLL E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 271 IRSMAVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQALPVLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_PSEA7 (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain PA7) GN=fadA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = -1 Query: 575 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIA---NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 850 IR A A P P + KA+ AGL + ID+ E+NEAF+ A+ + KLL E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 271 IRSMAVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQALPVLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = -1 Query: 575 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIA---NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 850 IR A A P P A KA+ AGL + ID+ E+NEAF+ A+ + K+L E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 271 IRSMAVAGVDPAIMGYGPVPATQKALKRAGLTIADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_MARMS (3-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain MWYL1) GN=fadA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 45/97 (46.39%), Postives = 57/97 (58.76%), Query Frame = -1 Query: 569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK---LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850 +R A A P P A KA+ AGL + ID E+NEAF+ +I K LL L ++VN +GGA++LGHPLGCSG RI TLL V+R K Sbjct: 271 VRSMAVAGCDPAIMGYGPVPATKKALKRAGLTIADIDIVELNEAFAAQSIPVLKDLGLLDLVDDKVNLNGGAIALGHPLGCSGTRISTTLLNVMREK 367
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13 Identity = 45/97 (46.39%), Postives = 56/97 (57.73%), Query Frame = -1 Query: 569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK---LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850 IR A A P P A KA+ANAGL ID E+NEAF+ A+ K LL ++VN +GGA++LGHP GCSG RI TLL V++ K Sbjct: 271 IRSMALAGVDPSIMGYGPVPATQKALANAGLSIEDIDVVELNEAFAAQALPVLKDLNLLDAMEDKVNLYGGAIALGHPFGCSGTRITGTLLSVMQDK 367
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13 Identity = 42/80 (52.50%), Postives = 53/80 (66.25%), Query Frame = -1 Query: 569 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIA---NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 799 P A KA+A AGL IDY E+NEAF+ ++ + KLL E+VN +GGA++LGHPLGCSGARI TLL V+ K Sbjct: 288 PVPATQKALARAGLTIDDIDYVELNEAFAAQSLPVAKDLKLLDKMEEKVNLNGGAIALGHPLGCSGARITGTLLNVMEWK 367
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: ATOB_HAEIN (Acetyl-CoA acetyltransferase OS=Haemophilus influenzae GN=atoB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13 Identity = 43/94 (45.74%), Postives = 52/94 (55.32%), Query Frame = -1 Query: 569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850 IR +A P P A KA+ AG+ ID E NEAF+ + K L LD + N HGGA++LGHP+G SGARILVTLL L K Sbjct: 276 IRSYASGGVDPSVMGLGPVPATQKALKKAGINLDDIDLIEANEAFASQFLGVGKDLNLDMNKTNIHGGAIALGHPIGASGARILVTLLHNLIEK 369
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIL_CHRVO (Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum GN=phaA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = -1 Query: 569 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 850 I+G+A PE P A KA++ AG +D E NEAF+ A+ K LG ++VN +GGA++LGHP+G SG R+LVTLL ++ + Sbjct: 275 IKGYALTGCEPEIMGIGPVSATRKALSKAGWTVEDLDLVEANEAFAAQALGVAKELGWGSDKVNVNGGAIALGHPIGASGCRVLVTLLHEMQRR 368 The following BLAST results are available for this feature:
BLAST of CF832598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 159
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832598 ID=CF832598; Name=CF832598; organism=Citrus sinensis; type=EST; length=850bpback to top |