CF832599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadI PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11 Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1 Query: 103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651 K + IV RTP + VSA +G + + L R+ + P L++++ +G V+ AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMDVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadI PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11 Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1 Query: 103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651 K + IV RTP + VSA +G + + L R+ + P L++++ +G V+ AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMDVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadI PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11 Identity = 57/207 (27.54%), Postives = 91/207 (43.96%), Query Frame = 1 Query: 115 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGL 687 + IV RTP + VSA +G + + L R+ + P LV+++ +G V+ AR+ LG G+ + ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A H I+R +QD+ A RS SG+ Sbjct: 15 IAIVSGLRTPFAKQATAFHGVSALDMGKMVVNELLSRSELDPKLVEQLVYGQVVQMPAAPNIAREIVLGTGMNVATDAYSVTRACATSFQSTVNIAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLTKARTFGQKLAIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTHGISRADQDAMAHRSHTLAAQTWASGV 221
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1 Query: 103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651 K + IV RTP + VSA +G + + L R+ + P L++++ +G V+ AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadI PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1 Query: 103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651 K + IV RTP + VSA +G + + L R+ + P L++++ +G V+ AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadI PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1 Query: 103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651 K + IV RTP + VSA +G + + L R+ + P L++++ +G V+ AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHEB2 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS223) GN=fadI PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1 Query: 103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651 K + IV RTP + VSA +G + + L R+ + P L++++ +G V+ AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadI PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 54/203 (26.60%), Postives = 90/203 (44.33%), Query Frame = 1 Query: 115 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQ 675 + IV RTP + V A LG + + L R+ + P +++++ FG V+ AR+ LG G+ ++++ C++ +AV A+S+ G +AGG +S S P + L +A K G + L+ + + MG AE A H ITR++QD+ A RS + +AAQ Sbjct: 15 IAIVSGLRTPFARQATAYHGVPAVDLGKMVVGELLARSEIPPEVIEQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARTLVDANKARTAGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQMAKTHGITREQQDALAHRSHQ--LAAQ 215
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadI PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11 Identity = 59/222 (26.58%), Postives = 95/222 (42.79%), Query Frame = 1 Query: 73 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGMLKDGLWDVY----------NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSG 684 M L+ + K + IV RTP + VSA +G + + L R+ + P ++++ +G V+ AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L GL D+ MG AE A + I+R +QD+ A RS +SG Sbjct: 1 MSELQQVRNAKGDRIAIVMGLRTPFAKQATAFHGVSALDMGKMVVNELLSRSELDPKEIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSTVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKWAIIRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWDSG 220 The following BLAST results are available for this feature:
BLAST of CF832599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832599 ID=CF832599; Name=CF832599; organism=Citrus sinensis; type=EST; length=700bpback to top |