CF832599

Overview
NameCF832599
Unique NameCF832599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadI PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1
Query:  103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651
            K   + IV   RTP      +   VSA  +G + +   L R+ + P L++++ +G V+        AR+  LG G+  S    ++ + C++  ++ +  A+SI  G  +I +AGG +S S  P    K LA A     K    G    +   L  KD       + +      MG  AE  A  + I+R +QD+ A RS
Sbjct:   11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMDVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadI PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1
Query:  103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651
            K   + IV   RTP      +   VSA  +G + +   L R+ + P L++++ +G V+        AR+  LG G+  S    ++ + C++  ++ +  A+SI  G  +I +AGG +S S  P    K LA A     K    G    +   L  KD       + +      MG  AE  A  + I+R +QD+ A RS
Sbjct:   11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMDVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadI PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 57/207 (27.54%), Postives = 91/207 (43.96%), Query Frame = 1
Query:  115 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGL 687
            + IV   RTP      +   VSA  +G + +   L R+ + P LV+++ +G V+        AR+  LG G+  +    ++ + C++  ++ +  A+SI  G  +I +AGG +S S  P    K LA A     K    G    +   L  KD       + +      MG  AE  A  H I+R +QD+ A RS         SG+
Sbjct:   15 IAIVSGLRTPFAKQATAFHGVSALDMGKMVVNELLSRSELDPKLVEQLVYGQVVQMPAAPNIAREIVLGTGMNVATDAYSVTRACATSFQSTVNIAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLTKARTFGQKLAIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTHGISRADQDAMAHRSHTLAAQTWASGV 221          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1
Query:  103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651
            K   + IV   RTP      +   VSA  +G + +   L R+ + P L++++ +G V+        AR+  LG G+  S    ++ + C++  ++ +  A+SI  G  +I +AGG +S S  P    K LA A     K    G    +   L  KD       + +      MG  AE  A  + I+R +QD+ A RS
Sbjct:   11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadI PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1
Query:  103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651
            K   + IV   RTP      +   VSA  +G + +   L R+ + P L++++ +G V+        AR+  LG G+  S    ++ + C++  ++ +  A+SI  G  +I +AGG +S S  P    K LA A     K    G    +   L  KD       + +      MG  AE  A  + I+R +QD+ A RS
Sbjct:   11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadI PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1
Query:  103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651
            K   + IV   RTP      +   VSA  +G + +   L R+ + P L++++ +G V+        AR+  LG G+  S    ++ + C++  ++ +  A+SI  G  +I +AGG +S S  P    K LA A     K    G    +   L  KD       + +      MG  AE  A  + I+R +QD+ A RS
Sbjct:   11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHEB2 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS223) GN=fadI PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1
Query:  103 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 651
            K   + IV   RTP      +   VSA  +G + +   L R+ + P L++++ +G V+        AR+  LG G+  S    ++ + C++  ++ +  A+SI  G  +I +AGG +S S  P    K LA A     K    G    +   L  KD       + +      MG  AE  A  + I+R +QD+ A RS
Sbjct:   11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadI PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 54/203 (26.60%), Postives = 90/203 (44.33%), Query Frame = 1
Query:  115 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQ 675
            + IV   RTP      +   V A  LG + +   L R+ + P +++++ FG V+        AR+  LG G+       ++++ C++  +AV   A+S+  G     +AGG +S S  P        + L +A K    G    +   L+          + +      MG  AE  A  H ITR++QD+ A RS +  +AAQ
Sbjct:   15 IAIVSGLRTPFARQATAYHGVPAVDLGKMVVGELLARSEIPPEVIEQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARTLVDANKARTAGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQMAKTHGITREQQDALAHRSHQ--LAAQ 215          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADI_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadI PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 59/222 (26.58%), Postives = 95/222 (42.79%), Query Frame = 1
Query:   73 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGMLKDGLWDVY----------NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSG 684
            M  L+   + K   + IV   RTP      +   VSA  +G + +   L R+ + P  ++++ +G V+        AR+  LG G+  S    ++ + C++  ++ +  A+SI  G  +I +AGG +S S  P    K LA A     K    G    +   L  GL D+               MG  AE  A  + I+R +QD+ A RS        +SG
Sbjct:    1 MSELQQVRNAKGDRIAIVMGLRTPFAKQATAFHGVSALDMGKMVVNELLSRSELDPKEIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSTVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKWAIIRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWDSG 220          
The following BLAST results are available for this feature:
BLAST of CF832599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
FADI_SHESM3.791e-1127.643-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADI_SHESA3.791e-1127.643-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADI_SHEAM3.791e-1127.543-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]
FADI_SHEB94.952e-1127.643-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB84.952e-1127.643-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB54.952e-1127.643-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB24.952e-1127.643-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_ENTS84.952e-1126.603-ketoacyl-CoA thiolase OS=Enterobacter sakazakii ... [more]
FADI_SHELP6.467e-1126.583-ketoacyl-CoA thiolase OS=Shewanella loihica (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832599 ID=CF832599; Name=CF832599; organism=Citrus sinensis; type=EST; length=700bp
CGGTAACTAATAAGCAAAACTCGTCTCTCTTTCAAGTTTAAAGTTAAAGA
TTCTTTGAAGATACTATTTAGCATGGTGCCTTTAGAACCTTCAGAATCTA
TCAAAGCACGAGATGTTTGTATTGTGGGTGTTGCACGTACACCAATGGGA
GGCTTTCTTGGCTCGCTCTCGTCTGTTTCAGCTACAAAGCTGGGTTCCAT
TGCTATCGAATGTGCTCTTAAGAGGGCCAACGTGAAACCACTCCTTGTGC
AAGAAGTCTTCTTTGGGAACGTTCTTAGCGCCAATTTAGGACAGGCTCCC
GCTAGACAGGCCGCCTTAGGTGCTGGGATTCCTAATTCTGTCGTATGCAC
CACTATTAACAAAGTCTGTTCATCTGGGATGAAAGCTGTAATGCTTGCTG
CACAGAGTATTCAATTGGGTATCAATGATATTGTTGTTGCGGGTGGCATG
GAAAGCATGTCCAATGCGCCCAAGTATCTAGCAGAAGCAAGAAAGGGATC
TCGACTGGGACATGATACTATTGTTGATGGCATGCTCAAAGATGGCCTGT
GGGATGTCTATAATGACTTTGGGATGGGAGTATGTGCAGAAATATGTGCT
AATAAACATACCATAACAAGGGATGAGCAGGATTCATATGCTATTAGAAG
CTTTAAGCGTGGGATTGCTGCACAAAATTCTGGTCTCTTTGCTTGGGAAA
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