CF832599

Overview
NameCF832599
Unique NameCF832599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 67/199 (33.67%), Postives = 106/199 (53.27%), Query Frame = 1
Query:  121 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEAR----KGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            IV   RTP G + G L++V A  LG+I I   ++R  +V    V +V +G    A    +   R +AL AG+P  V  TT+N++C S + A+ +AA++I+ G   +++AGG+ESMS AP  + ++     +  ++   T+    +   L  +Y    M   AE  A +  I R++QD +A  S +R  AAQ  G FA E
Sbjct:    6 IVDAIRTPFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMSRAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKE 204          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 67/199 (33.67%), Postives = 106/199 (53.27%), Query Frame = 1
Query:  121 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEAR----KGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            IV   RTP G + G L++V A  LG+I I   ++R  +V    V +V +G    A    +   R +AL AG+P  V  TT+N++C S + A+ +AA++I+ G   +++AGG+ESMS AP  + ++     +  ++   T+    +   L  +Y    M   AE  A +  I R++QD +A  S +R  AAQ  G FA E
Sbjct:    6 IVDAIRTPFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMSRAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKE 204          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.954e-20
Identity = 67/196 (34.18%), Postives = 101/196 (51.53%), Query Frame = 1
Query:  109 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL-SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690
            ++  IV  ARTP+G    GSL++V    LG+I ++  LKRA      + ++  G     A  G   AR     AG+P +V   T+N+ CSSG++++  AA+ I LG  D  +AGG ESMS  P           +GH T  +  L +   + Y    MG  AE  A K+ ++R++QD++A+RS +    A   G F
Sbjct:    2 KEAVIVSGARTPVGKAKKGSLATVRPDDLGAICVKETLKRAGGYEGNIDDLIIGCATPEAEQGLNMARNIGALAGLPYTVPAITVNRYCSSGLQSIAYAAEKIMLGAYDTAIAGGAESMSQVP----------MMGHVTRPNLALAEKAPEYY--MSMGHTAEQVAKKYGVSREDQDAFAVRSHQNAAKALAEGKF 185          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 1
Query:  112 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            DV IV   RT +G GF GS  +V +  + +  ++  +K+ N+ P L+++V  GNVL+   G    R A L AGIP +     +N+ CSSG+ A+   A  I+ G  +  +AGG ESMS   +   + R   R+      D  ++  L        MG+  E  AN+  I+R+ QD +A +S+ +   A  SG F  E
Sbjct:   26 DVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTNYR---DPRVAPRIDPHLADDAQMEKCL------IPMGITNENVANQFNISRERQDEFAAKSYNKAAKAVASGAFKSE 213          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: THIKA_CANTR (3-ketoacyl-CoA thiolase A, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 1
Query:  112 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            DV IV   RT +G GF GS  SV +  + +  ++  +K+ N+ P L+++V  GNVL+   G    R A L AGIP +     +N+ CSSG+ A+   A  I+ G  +  +AGG ESMS   +   + R   R+      D  ++  L        MG+  E  AN+  I+R+ QD +A +S+ +   A  +G F  E
Sbjct:   26 DVVIVAAYRTAIGKGFKGSFRSVRSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTNYR---DPRVAPRIDPHLADDAQMEKCL------IPMGITNENVANQFNISRERQDEFAAKSYNKAAKAVAAGAFKSE 213          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 71/202 (35.15%), Postives = 103/202 (50.99%), Query Frame = 1
Query:  109 RDVCIVGVARTPMGGFLG-SLSSVSATKLGS-IAIECALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDT-IVDGMLKDGLWDVYNDFG-MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            +DV IV   RTPMG   G +  +V A  L + +     L+  N+ P  ++++++G V      G   AR AAL AGIP  V   T+N++C S M+A+  A+++IQ+G  DI + GG+E M + P           + H      GM K     V    G MG+ AE+    H I+R +QD +A RS +R  AA   G FA E
Sbjct:    2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMSSILLRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVP-----------MSHGVDFHPGMAK----SVAKASGMMGLTAEMLGKLHGISRQQQDEFAARSHRRAYAATVEGRFARE 188          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 72/202 (35.64%), Postives = 104/202 (51.49%), Query Frame = 1
Query:  109 RDVCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDT-IVDGMLKDGLWDVYNDFG-MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            +DV IV   RTPMG   G +  +V A  L +  ++  L R  N+ P  ++++++G V      G   AR AAL AGIP  V   T+N++C S M+A+  A+++IQ+G  DI + GG+E M + P           + H      GM K     V    G MG+ AE+    H I+R +QD +A RS +R  AA   G FA E
Sbjct:    2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMKSILLRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVP-----------MSHGVDFHPGMAK----SVAKASGMMGLTAEMLGKLHGISRQQQDEFAARSHRRAHAATVEGRFAKE 188          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17
Identity = 68/224 (30.36%), Postives = 108/224 (48.21%), Query Frame = 1
Query:   49 DSLKILFSMVPLEPSESIKA------RDVCIVGVARTP-MGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            D L  L + +   P++ + A       DV I    RT    G  G     S+++L +  +E  +K + + P L+ +V  GNVL+A  G    R A L AGIP +V    +N+ CSSG+ AV   A  I+ G  DI +  G+ESMSN     +     ++  ++      L            MG+ +E  A K+ ++R  QD++A +S+++  AAQ +G F  E
Sbjct:    2 DRLNNLATQLEQNPAKGLDAITSKNPDDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGNVLAAGAGATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCGVESMSNQYGPNSVTPFSNKFQNNEEAKKCL----------IPMGITSENVAAKYNVSRKAQDAFAAKSYEKAAAAQAAGKFDQE 215          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 63/199 (31.66%), Postives = 101/199 (50.75%), Query Frame = 1
Query:  106 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            A DV +V   RTP+G    G     +  +L S  +   L+   +KP  + ++  GNVL    G A AR A   +GIP +V  + +N+ CSSG++AV   A  I+ G  DI +A G+ESM+     L+E      +    + +   +D L        MG+ +E  A +  I+R +QD++A+ S ++  +AQ+ G F  E
Sbjct:   35 ASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMT-----LSERGNPGNISSRLLENEKARDCL------IPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAE 222          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 64/201 (31.84%), Postives = 93/201 (46.27%), Query Frame = 1
Query:   97 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690
            S+  RDV +V   RTPMG    G   +V A  L +  IE   +R   + P  V++V +G V  +   G   ARQ +L   IP+     T+N++C S M A+  AAQ+IQ G  D+ + GG+E M + P         +   +      M             MG+ AE+ A  H ITR++QD +  RS +    A   G F
Sbjct:    2 SLNPRDVVVVDCVRTPMGRAKNGCFRNVRAETLSAALIEALFERNPKLDPKEVEDVIWGCVNQTKEQGFNVARQISLLTRIPHESAAQTVNRLCGSAMSAIHTAAQAIQTGNGDVFLVGGVEHMGHVPMTEGFDHNPAASKYSAKASNM-------------MGLTAEMLAKMHGITREQQDEFGARSHRLAHEATQEGRF 189          
The following BLAST results are available for this feature:
BLAST of CF832599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
PCAF_ACIAD5.836e-2033.67Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
CATF_ACIAD5.836e-2033.67Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
FADA_BACSU9.954e-2034.183-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fa... [more]
THIKB_CANTR2.218e-1932.993-ketoacyl-CoA thiolase B, peroxisomal OS=Candida ... [more]
THIKA_CANTR2.218e-1932.993-ketoacyl-CoA thiolase A, peroxisomal OS=Candida ... [more]
FADA_AERS42.452e-1835.153-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (... [more]
FADA_AERHH4.182e-1835.643-ketoacyl-CoA thiolase OS=Aeromonas hydrophila su... [more]
THIK_YARLI2.076e-1730.363-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia l... [more]
THIKB_RAT3.540e-1731.663-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]
FADA_MARAV4.624e-1731.843-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832599 ID=CF832599; Name=CF832599; organism=Citrus sinensis; type=EST; length=700bp
CGGTAACTAATAAGCAAAACTCGTCTCTCTTTCAAGTTTAAAGTTAAAGA
TTCTTTGAAGATACTATTTAGCATGGTGCCTTTAGAACCTTCAGAATCTA
TCAAAGCACGAGATGTTTGTATTGTGGGTGTTGCACGTACACCAATGGGA
GGCTTTCTTGGCTCGCTCTCGTCTGTTTCAGCTACAAAGCTGGGTTCCAT
TGCTATCGAATGTGCTCTTAAGAGGGCCAACGTGAAACCACTCCTTGTGC
AAGAAGTCTTCTTTGGGAACGTTCTTAGCGCCAATTTAGGACAGGCTCCC
GCTAGACAGGCCGCCTTAGGTGCTGGGATTCCTAATTCTGTCGTATGCAC
CACTATTAACAAAGTCTGTTCATCTGGGATGAAAGCTGTAATGCTTGCTG
CACAGAGTATTCAATTGGGTATCAATGATATTGTTGTTGCGGGTGGCATG
GAAAGCATGTCCAATGCGCCCAAGTATCTAGCAGAAGCAAGAAAGGGATC
TCGACTGGGACATGATACTATTGTTGATGGCATGCTCAAAGATGGCCTGT
GGGATGTCTATAATGACTTTGGGATGGGAGTATGTGCAGAAATATGTGCT
AATAAACATACCATAACAAGGGATGAGCAGGATTCATATGCTATTAGAAG
CTTTAAGCGTGGGATTGCTGCACAAAATTCTGGTCTCTTTGCTTGGGAAA
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