CF832599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 63/200 (31.50%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 109 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699 + IV RTPMG G +V A L + ++ L+ + P +++V +G V G AR A+L AGIP + T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS +R AA G FA E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKE 188
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 63/200 (31.50%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 109 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699 + IV RTPMG G +V A L + ++ L+ + P +++V +G V G AR A+L AGIP + T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS +R AA G FA E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKE 188
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16 Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 1 Query: 106 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699 A DV +V RTP+G G + + +L S + L+ +KP + ++ GNVL G AR A +GIP +V +T+N+ CSSG++AV A I+ G DI +A G+ESMS L+ + + +D L MG+ +E A + I+R +QD +A+ S ++ +AQ+ G F E Sbjct: 35 ASDVVVVHGRRTPIGRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMS-----LSGMGNPGNISSRLLESEKARDCLTP------MGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAE 222
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16 Identity = 64/200 (32.00%), Postives = 93/200 (46.50%), Query Frame = 1 Query: 109 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699 + IV RTPMG G ++ A L + ++ L R + P +++V +G V G AR AAL AGIP T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR +QD +A+RS +R AA G FA E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNMRAESLSAELMKALLVRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNAALLAGIPKQAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIVGGVEHMGHVPMNHGVDFHPGLATNVAKASGM-------------MGLTAEMLGKMHGITRQQQDEFAVRSHQRAHAATVEGRFANE 188
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16 Identity = 62/200 (31.00%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 109 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699 + IV RTPMG G +V A L + ++ L+ + P +++V +G V G AR A+L AGIP + T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H I+R++QD++A+RS +R AA G FA E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNAIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGISREQQDAFAVRSHQRAHAATVEGRFAKE 188
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16 Identity = 65/204 (31.86%), Postives = 94/204 (46.08%), Query Frame = 1 Query: 97 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLS-ANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699 S++ RDV IV ARTPMG G +V A L + I L R A + P + ++ +G V+ G AR L AG+P++V T+N++C S M A+ AA +I G+ D+ + GG+E M + LGH MG+ AE + H ITR+ D + RS ++ A G FA E Sbjct: 2 SLQPRDVVIVDYARTPMGRSKNGCYRNVRADDLSADLITGLLARNAALDPAQIDDMIWGCVMQRGEQGFNVARNILLRAGLPHTVPAQTVNRLCGSSMSALHTAAANIMAGLGDVYLVGGVEHMGHIDMN-QHVDPNPALGHSV------------AQAAGSMGLTAEYLSLLHGITREAMDEFGARSHRKAAEATEQGKFARE 192
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15 Identity = 65/204 (31.86%), Postives = 100/204 (49.02%), Query Frame = 1 Query: 97 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG---MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690 S+ RDV IV RTPMG G + + A + + I L+R A V P V++V +G V + G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M GH +++ G+ + +Y MG+ AE+ H ITR++QD++ +RS + A G F Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNAKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKF 189
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15 Identity = 62/200 (31.00%), Postives = 95/200 (47.50%), Query Frame = 1 Query: 109 RDVCIVGVARTPMGGFLGSL-SSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699 + IV RTPMG G + +V A L + ++ L R V P +++V +G V G AR A+L AG+P + T+N++C S M+A+ A+++I G+ D + GG+E M + P + GM MG+ AE+ H I+R+ QD +A+RS +R AA G FA E Sbjct: 2 KQAVIVDCIRTPMGRSKGGVFRNVRAETLSAELMKALLLRNPGVDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGVPKTAGAVTVNRLCGSSMEALHQASRAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLAANVAKASGM-------------MGLTAEMLGKLHGISREMQDQFAVRSHQRAHAASIEGRFANE 188
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15 Identity = 64/204 (31.37%), Postives = 101/204 (49.51%), Query Frame = 1 Query: 97 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG---MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690 S+ RDV IV RTPMG G + + A + + I L+R + V P V++V +G V + G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M GH +++ G+ + +Y MG+ AE+ H I+R++QD++A+RS + A G F Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKF 189
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15 Identity = 64/211 (30.33%), Postives = 101/211 (47.87%), Query Frame = 1 Query: 82 LEPSESIKARDVCIV-----GVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699 L + A DV +V + R GGF + +L S + LK N++P + ++ GNVL G AR A + IP +V +T+N+ CSSG++AV A I+ G DI +A G+ESMS LA+ + + +D L MG+ +E A + I+R++QD++A+ S ++ AQ+ G F E Sbjct: 27 LSGAPQASAADVVVVHGRRTAICRAGRGGF----KDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMS-----LADRGNPGNITSRLMEKEKARDCL------IPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAE 222 The following BLAST results are available for this feature:
BLAST of CF832599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832599 ID=CF832599; Name=CF832599; organism=Citrus sinensis; type=EST; length=700bpback to top |