CF832599

Overview
NameCF832599
Unique NameCF832599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16
Identity = 63/200 (31.50%), Postives = 96/200 (48.00%), Query Frame = 1
Query:  109 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            +   IV   RTPMG    G   +V A  L +  ++   L+   + P  +++V +G V      G   AR A+L AGIP +    T+N++C S M+A+  AA++I  G+ D  + GG+E M + P             +     GM             MG+ AE+    H ITR++QD++A+RS +R  AA   G FA E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKE 188          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16
Identity = 63/200 (31.50%), Postives = 96/200 (48.00%), Query Frame = 1
Query:  109 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            +   IV   RTPMG    G   +V A  L +  ++   L+   + P  +++V +G V      G   AR A+L AGIP +    T+N++C S M+A+  AA++I  G+ D  + GG+E M + P             +     GM             MG+ AE+    H ITR++QD++A+RS +R  AA   G FA E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKE 188          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 1
Query:  106 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            A DV +V   RTP+G    G   + +  +L S  +   L+   +KP  + ++  GNVL    G   AR A   +GIP +V  +T+N+ CSSG++AV   A  I+ G  DI +A G+ESMS     L+       +    +     +D L        MG+ +E  A +  I+R +QD +A+ S ++  +AQ+ G F  E
Sbjct:   35 ASDVVVVHGRRTPIGRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMS-----LSGMGNPGNISSRLLESEKARDCLTP------MGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAE 222          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 64/200 (32.00%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  109 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            +   IV   RTPMG    G   ++ A  L +  ++  L R   + P  +++V +G V      G   AR AAL AGIP      T+N++C S M+A+  AA++I  G+ D  + GG+E M + P             +     GM             MG+ AE+    H ITR +QD +A+RS +R  AA   G FA E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNMRAESLSAELMKALLVRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNAALLAGIPKQAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIVGGVEHMGHVPMNHGVDFHPGLATNVAKASGM-------------MGLTAEMLGKMHGITRQQQDEFAVRSHQRAHAATVEGRFANE 188          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 62/200 (31.00%), Postives = 96/200 (48.00%), Query Frame = 1
Query:  109 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            +   IV   RTPMG    G   +V A  L +  ++   L+   + P  +++V +G V      G   AR A+L AGIP +    T+N++C S M+A+  AA++I  G+ D  + GG+E M + P             +     GM             MG+ AE+    H I+R++QD++A+RS +R  AA   G FA E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNAIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGISREQQDAFAVRSHQRAHAATVEGRFAKE 188          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 65/204 (31.86%), Postives = 94/204 (46.08%), Query Frame = 1
Query:   97 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLS-ANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            S++ RDV IV  ARTPMG    G   +V A  L +  I   L R A + P  + ++ +G V+     G   AR   L AG+P++V   T+N++C S M A+  AA +I  G+ D+ + GG+E M +             LGH                    MG+ AE  +  H ITR+  D +  RS ++   A   G FA E
Sbjct:    2 SLQPRDVVIVDYARTPMGRSKNGCYRNVRADDLSADLITGLLARNAALDPAQIDDMIWGCVMQRGEQGFNVARNILLRAGLPHTVPAQTVNRLCGSSMSALHTAAANIMAGLGDVYLVGGVEHMGHIDMN-QHVDPNPALGHSV------------AQAAGSMGLTAEYLSLLHGITREAMDEFGARSHRKAAEATEQGKFARE 192          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 65/204 (31.86%), Postives = 100/204 (49.02%), Query Frame = 1
Query:   97 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG---MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690
            S+  RDV IV   RTPMG   G +  +  A  + +  I   L+R A V P  V++V +G V  +   G   AR A+L   IP++    T++++C S M A+  AAQ+I  G  D+ V GG+E M                GH +++ G+  +    +Y       MG+ AE+    H ITR++QD++ +RS +    A   G F
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNAKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKF 189          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 62/200 (31.00%), Postives = 95/200 (47.50%), Query Frame = 1
Query:  109 RDVCIVGVARTPMGGFLGSL-SSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            +   IV   RTPMG   G +  +V A  L +  ++  L R   V P  +++V +G V      G   AR A+L AG+P +    T+N++C S M+A+  A+++I  G+ D  + GG+E M + P             +     GM             MG+ AE+    H I+R+ QD +A+RS +R  AA   G FA E
Sbjct:    2 KQAVIVDCIRTPMGRSKGGVFRNVRAETLSAELMKALLLRNPGVDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGVPKTAGAVTVNRLCGSSMEALHQASRAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLAANVAKASGM-------------MGLTAEMLGKLHGISREMQDQFAVRSHQRAHAASIEGRFANE 188          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 64/204 (31.37%), Postives = 101/204 (49.51%), Query Frame = 1
Query:   97 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG---MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690
            S+  RDV IV   RTPMG   G +  +  A  + +  I   L+R + V P  V++V +G V  +   G   AR A+L   IP++    T++++C S M A+  AAQ+I  G  D+ V GG+E M                GH +++ G+  +    +Y       MG+ AE+    H I+R++QD++A+RS +    A   G F
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKF 189          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 64/211 (30.33%), Postives = 101/211 (47.87%), Query Frame = 1
Query:   82 LEPSESIKARDVCIV-----GVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            L  +    A DV +V      + R   GGF       +  +L S  +   LK  N++P  + ++  GNVL    G   AR A   + IP +V  +T+N+ CSSG++AV   A  I+ G  DI +A G+ESMS     LA+      +    +     +D L        MG+ +E  A +  I+R++QD++A+ S ++   AQ+ G F  E
Sbjct:   27 LSGAPQASAADVVVVHGRRTAICRAGRGGF----KDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMS-----LADRGNPGNITSRLMEKEKARDCL------IPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAE 222          
The following BLAST results are available for this feature:
BLAST of CF832599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
FADA_SHESM2.295e-1631.503-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_SHESA2.295e-1631.503-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
THIKA_MOUSE2.997e-1631.663-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musc... [more]
FADA_SHELP3.914e-1632.003-ketoacyl-CoA thiolase OS=Shewanella loihica (str... [more]
FADA_SHESR6.677e-1631.003-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_SACD26.677e-1631.863-ketoacyl-CoA thiolase OS=Saccharophagus degradan... [more]
FADA_PSEF51.487e-1531.863-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
FADA_SHEAM2.537e-1531.003-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]
FADA_PSEFR2.537e-1531.373-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fa... [more]
THIK_HUMAN3.314e-1530.333-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832599 ID=CF832599; Name=CF832599; organism=Citrus sinensis; type=EST; length=700bp
CGGTAACTAATAAGCAAAACTCGTCTCTCTTTCAAGTTTAAAGTTAAAGA
TTCTTTGAAGATACTATTTAGCATGGTGCCTTTAGAACCTTCAGAATCTA
TCAAAGCACGAGATGTTTGTATTGTGGGTGTTGCACGTACACCAATGGGA
GGCTTTCTTGGCTCGCTCTCGTCTGTTTCAGCTACAAAGCTGGGTTCCAT
TGCTATCGAATGTGCTCTTAAGAGGGCCAACGTGAAACCACTCCTTGTGC
AAGAAGTCTTCTTTGGGAACGTTCTTAGCGCCAATTTAGGACAGGCTCCC
GCTAGACAGGCCGCCTTAGGTGCTGGGATTCCTAATTCTGTCGTATGCAC
CACTATTAACAAAGTCTGTTCATCTGGGATGAAAGCTGTAATGCTTGCTG
CACAGAGTATTCAATTGGGTATCAATGATATTGTTGTTGCGGGTGGCATG
GAAAGCATGTCCAATGCGCCCAAGTATCTAGCAGAAGCAAGAAAGGGATC
TCGACTGGGACATGATACTATTGTTGATGGCATGCTCAAAGATGGCCTGT
GGGATGTCTATAATGACTTTGGGATGGGAGTATGTGCAGAAATATGTGCT
AATAAACATACCATAACAAGGGATGAGCAGGATTCATATGCTATTAGAAG
CTTTAAGCGTGGGATTGCTGCACAAAATTCTGGTCTCTTTGCTTGGGAAA
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