CF832599

Overview
NameCF832599
Unique NameCF832599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 67/198 (33.84%), Postives = 97/198 (48.99%), Query Frame = 1
Query:  115 VCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            V IV   RTPMG   G +   V A  L +  +   L R  +V P  + ++++G V      G   AR AAL A IP+SV  TT+N++C S M+A+  AA++I +G     + GG+E M + P           + H       L   +        MG+ AE+ A  H I+R+ QD +A RS +R  AA  +G FA E
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRHVRAEDLSAHLMRSLLSRNPSVDPATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPATTVNRLCGSSMQALHDAARAIMVGDARTCLIGGVEHMGHVP-----------MSHGVDFHPGLSRNVAKAAG--MMGLTAEMLARMHGISREMQDRFAARSHQRAAAATQAGHFAAE 188          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 62/199 (31.16%), Postives = 95/199 (47.74%), Query Frame = 1
Query:   97 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSG 684
            S+  +DV IV   RTPMG    G    V A KL +  I+  + R  N    L ++V +G V  +   G   AR  ++ AG+P +    T+N++C S M+A+  A+QSI  G  D+ V GG+E M +             + H   ++  +        N   MG+ AE+    H ITR++QD++ +RS K    A   G
Sbjct:    2 SLNPKDVVIVDAVRTPMGKSRNGQFRHVRAEKLSAQLIQALMARNPNWDIQLTEDVIWGCVNQTKEQGMNIARNISMLAGLPRTSAAQTVNRLCGSSMQALHSASQSIMTGNGDVFVIGGVEHMGHV-----------AMDHGIDLNPEMSKVTAKASN--MMGLTAEMLGKMHGITREQQDAFGVRSHKLAWEATQQG 187          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 63/200 (31.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  109 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            +   IV   RTPMG    G   +V A  L +  ++  + R   + P  +++V +G V      G   AR A+L AGIP +    T+N++C S M A+  AA++I  G  D  + GG+E M + P                   GM             MG+ AE+    H ITR++QD++A+RS +R  AA   G FA E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKALMVRNPQLDPNDIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDALHQAARAIMTGQGDTFIIGGVEHMGHVPMNHGVDFHPGLANRVAKASGM-------------MGLTAEMLGKMHGITREQQDAFAVRSHQRAHAATIEGRFAKE 188          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 64/204 (31.37%), Postives = 99/204 (48.53%), Query Frame = 1
Query:   97 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG---MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690
            S+  RDV IV   RTPMG   G +  +  A  + +  I   L+R   V P  V++V +G V  +   G   AR A+L   IP++    T++++C S M A+  AAQ+I  G  D+ V GG+E M                GH +++ G+  +    +Y       MG+ AE+    H ITR++QD++ +RS +    A   G F
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNTKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKF 189          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 65/196 (33.16%), Postives = 94/196 (47.96%), Query Frame = 1
Query:  121 IVGVARTPMGGFLGSL-SSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWE 699
            IV   RTPMG   G +  +  A  L +  ++  L R   V P  + ++++G V      G   AR AAL AGIP+SV   T+N++C S M+A+  AA++I  G  D  + GG+E M + P           + H       L   +        MG+ AE  A  H I+R++QD +A RS +R  AA   G F  E
Sbjct:    6 IVDCIRTPMGRSKGGVFKNKRAEDLSAHLMKGLLDRNPAVDPASIDDIYWGCVQQTLEQGFNVARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGAGDTYLIGGVEHMGHVP-----------MTHGNDFHPGLATSIAQAAG--SMGLTAEYLATLHGISREQQDEFAYRSHQRAQAATVEGRFRRE 188          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 60/201 (29.85%), Postives = 92/201 (45.77%), Query Frame = 1
Query:   97 SIKARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690
            S+  RDV ++   R+PMG    G   +V A  L +  I+    R + V P  V+++ +G V  +   G   ARQ +L   IP++    T+N++C S M A+  AAQ+I  G  D+ V GG+E M + P         +   +      M             MG+ AE+ A  H I+R +QD +  RS +    A   G F
Sbjct:    2 SLNPRDVVVIDCVRSPMGRAKAGCFRNVRAETLSATLIDALFDRNDKVDPAEVEDLIWGCVNQTLEQGFNVARQISLLTRIPHTSSAQTVNRLCGSAMSAIHTAAQAIMTGNGDVFVVGGVEHMGHVPMTQGFDHNPAASKYSAKASNM-------------MGLTAEMLAKMHGISRQQQDEFGARSHRLAHEATLEGRF 189          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15
Identity = 60/197 (30.46%), Postives = 97/197 (49.24%), Query Frame = 1
Query:  109 RDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690
            ++V IV   RTPMG    G      A  L +  ++  L+R  NV P  ++++++G V      G   AR A+L AG+P S+  TT+N++C S M+A+  A+++I +G  DI + GG+E M + P             +     GM             MG+ AE+    H I+R++QD++A  S ++   A   G F
Sbjct:    2 KNVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLERNPNVDPNQIEDIYWGCVQQTLEQGFNIARNASLLAGLPKSIAATTVNRLCGSSMQALHDASRAIMVGDADICIIGGVEHMGHVPMNHGVDFHSGLSKNVAKASGM-------------MGLTAEMLGKMHGISREQQDAFAFASHQKAHRATIEGHF 185          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_PSESM (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. tomato GN=fadA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15
Identity = 63/201 (31.34%), Postives = 93/201 (46.27%), Query Frame = 1
Query:   97 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690
            S+  RDV IV   RTPMG   G +  +  A  + +  I   L+R N V P  V++V +G V  +   G   AR A+L   IP++    T++++C S M A+  AAQ+I     D+ V GG+E M +               H     GM             MG+ AE+    H ITR++QD++ +RS +    A   G F
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHMGHVSMMHGVDPNPHMSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKF 189          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15
Identity = 63/201 (31.34%), Postives = 93/201 (46.27%), Query Frame = 1
Query:   97 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690
            S+  RDV IV   RTPMG   G +  +  A  + +  I   L+R N V P  V++V +G V  +   G   AR A+L   IP++    T++++C S M A+  AAQ+I     D+ V GG+E M +               H     GM             MG+ AE+    H ITR++QD++ +RS +    A   G F
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHMGHVSMMHGVDPNPHMSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKF 189          
BLAST of CF832599 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 62/201 (30.85%), Postives = 93/201 (46.27%), Query Frame = 1
Query:   97 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLF 690
            S+  RDV IV   RTPMG   G +  +  A  + +  I   L+R N V P  V++V +G V  +   G   AR A+L   IP++    T++++C S M A+  AAQ+I     D+ + GG+E M +               H     GM             MG+ AE+    H ITR++QD++ +RS +    A   G F
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFIIGGVEHMGHVSMMHGVDPNPHMSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKF 189          
The following BLAST results are available for this feature:
BLAST of CF832599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
FADA_ERWT93.314e-1533.843-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (s... [more]
FADA_ALCBS3.314e-1531.163-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis... [more]
FADA_SHEFN4.328e-1531.503-ketoacyl-CoA thiolase OS=Shewanella frigidimarin... [more]
FADA_PSEPF4.328e-1531.373-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
FADA_PSEHT5.652e-1533.163-ketoacyl-CoA thiolase OS=Pseudoalteromonas halop... [more]
FADA_HAHCH5.652e-1529.853-ketoacyl-CoA thiolase OS=Hahella chejuensis (str... [more]
FADA_ALISL7.382e-1530.463-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida ... [more]
FADA_PSESM9.642e-1531.343-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_PSE149.642e-1531.343-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_PSEU21.259e-1430.853-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832599 ID=CF832599; Name=CF832599; organism=Citrus sinensis; type=EST; length=700bp
CGGTAACTAATAAGCAAAACTCGTCTCTCTTTCAAGTTTAAAGTTAAAGA
TTCTTTGAAGATACTATTTAGCATGGTGCCTTTAGAACCTTCAGAATCTA
TCAAAGCACGAGATGTTTGTATTGTGGGTGTTGCACGTACACCAATGGGA
GGCTTTCTTGGCTCGCTCTCGTCTGTTTCAGCTACAAAGCTGGGTTCCAT
TGCTATCGAATGTGCTCTTAAGAGGGCCAACGTGAAACCACTCCTTGTGC
AAGAAGTCTTCTTTGGGAACGTTCTTAGCGCCAATTTAGGACAGGCTCCC
GCTAGACAGGCCGCCTTAGGTGCTGGGATTCCTAATTCTGTCGTATGCAC
CACTATTAACAAAGTCTGTTCATCTGGGATGAAAGCTGTAATGCTTGCTG
CACAGAGTATTCAATTGGGTATCAATGATATTGTTGTTGCGGGTGGCATG
GAAAGCATGTCCAATGCGCCCAAGTATCTAGCAGAAGCAAGAAAGGGATC
TCGACTGGGACATGATACTATTGTTGATGGCATGCTCAAAGATGGCCTGT
GGGATGTCTATAATGACTTTGGGATGGGAGTATGTGCAGAAATATGTGCT
AATAAACATACCATAACAAGGGATGAGCAGGATTCATATGCTATTAGAAG
CTTTAAGCGTGGGATTGCTGCACAAAATTCTGGTCTCTTTGCTTGGGAAA
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