CF832603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832603 vs. ExPASy Swiss-Prot
Match: IDI1_HUMAN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo sapiens GN=IDI1 PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.380e-38 Identity = 76/145 (52.41%), Postives = 109/145 (75.17%), Query Frame = -1 Query: 307 SHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 741 SHPL +EL E +ALGVR AAQR+L ELGI E+VP +E L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+ Y YV++E+LKELL+KA +GE +K++PWF+++ FLFKWWD+L LN+ +D + I+++ Sbjct: 87 SHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCYVSKEELKELLKKAASGE--IKITPWFKIIAATFLFKWWDNLNH--LNQFVDHEKIYRM 227
BLAST of CF832603 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.016e-38 Identity = 74/145 (51.03%), Postives = 109/145 (75.17%), Query Frame = -1 Query: 307 SHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 741 SHPL EL E NA+GV+ AA+R+L ELGI E+V ++E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E+++E+L+KA +GE +KL+PWF+++ D FLFKWWD+L L+ +D + IH+L Sbjct: 87 SHPLSNPGELEENNAIGVKRAAKRRLKAELGIPLEEVDLNEMDYLTRIYYKAQSDGIWGEHEVDYILFLRKNVTLNPDPNEIKSYCYVSKEEVREILKKAASGE--IKLTPWFKIIADTFLFKWWDNLNH--LSPFVDHEKIHRL 227
BLAST of CF832603 vs. ExPASy Swiss-Prot
Match: IDI1_BOVIN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Bos taurus GN=IDI1 PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 8.946e-38 Identity = 75/145 (51.72%), Postives = 106/145 (73.10%), Query Frame = -1 Query: 307 SHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 741 SHPL SEL E +A+GVR AAQR+L ELGI E+VP +E L RI YKA SD WGEHE+DY+L + ++V++NP+P+E+ Y YV +E+L+EL+ KA GE +K++PWF+++ D FLFKWWD+L + LN +D + IH++ Sbjct: 87 SHPLSNPSELEENDAIGVRRAAQRRLKAELGIPMEEVPPEEINYLTRIHYKAQSDSIWGEHEIDYILLVKKNVTLNPDPNEIKSYCYVTKEELEELIGKAAHGE--IKITPWFQIIADTFLFKWWDNLNR--LNLFVDHEKIHRM 227
BLAST of CF832603 vs. ExPASy Swiss-Prot
Match: IDI1_RAT (Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus GN=Idi1 PE=2 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37 Identity = 74/145 (51.03%), Postives = 107/145 (73.79%), Query Frame = -1 Query: 307 SHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 741 SHPL EL E +A+GV+ AAQR+L ELGI E+V ++E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E+LKE+L+K GE +KL+PWF+++ D FLFKWWD+L L+ +D + IH++ Sbjct: 87 SHPLNNPGELEENDAMGVKRAAQRRLKAELGIPLEEVDLNEMNYLTRIYYKAQSDGIWGEHEIDYILFLRKNVTLNPDPNEIKSYCYVSKEELKEILKKEARGE--IKLTPWFKIIADAFLFKWWDNLNH--LSPFVDHEKIHRM 227
BLAST of CF832603 vs. ExPASy Swiss-Prot
Match: IDI1_PHARH (Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.884e-28 Identity = 66/151 (43.71%), Postives = 89/151 (58.94%), Query Frame = -1 Query: 304 SHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHL-----EKGTLNEVIDMKTIHKLT 741 SHPL + E+ EEN +GVR AA RKL ELG+ P D FT L RI Y APSDG WGEHE+DY+LF NP+EV++ +YV + +L+ + +E +PWF+L+ +FLF WWD L EKG +D K++ L+ Sbjct: 103 SHPLSIKGEVKEENQIGVRRAASRKLEHELGVPTSSTPPDSFTYLTRIHYLAPSDGLWGEHEIDYILFSTTPTEHTGNPNEVSDTRYVTKPELQAMFE-----DESNSFTPWFKLIARDFLFGWWDQLLARRNEKGE----VDAKSLEDLS 244
BLAST of CF832603 vs. ExPASy Swiss-Prot
Match: IDI2_HUMAN (Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.426e-28 Identity = 60/145 (41.38%), Postives = 95/145 (65.52%), Query Frame = -1 Query: 307 SHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 741 SHPLY +EL E++A+GVR AAQR+L ELGI E + ++ + +KA SD WGEHE+ YLL + ++V++NP+P E Y+++E+L ELL + GE +K++PW R + + FL++WW HL+ T +++ IH++ Sbjct: 87 SHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVTLNPDPSETKSILYLSQEELWELLEREARGE--VKVTPWLRTIAERFLYRWWPHLDDVT--PFVELHKIHRV 227
BLAST of CF832603 vs. ExPASy Swiss-Prot
Match: IDI1_SCHPO (Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces pombe GN=idi1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.096e-27 Identity = 66/136 (48.53%), Postives = 84/136 (61.76%), Query Frame = -1 Query: 352 SHPLYRESE---LIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWW---DHLEK 741 SHPL E + E GV+NAAQRKL ELGI A+ +P D+F L RI Y APS G WGEHE+DY+LF V ++ NP+EV YKYV E+LKE+ G +PWF+L+ ++F+FKWW DH K Sbjct: 88 SHPLDVAGERGNTLPEAVEGVKNAAQRKLFHELGIQAKYIPKDKFQFLTRIHYLAPSTGAWGEHEIDYILFFKGKVELDINPNEVQAYKYVTMEELKEMFSDPQYG-----FTPWFKLICEHFMFKWWQDVDHASK 218
BLAST of CF832603 vs. ExPASy Swiss-Prot
Match: IDI_DICDI (Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum GN=ipi PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.432e-27 Identity = 66/149 (44.30%), Postives = 104/149 (69.80%), Query Frame = -1 Query: 310 SHPLYRE-SELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPS--DGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVID-MKTIHK 741 SHPL+ SEL+EENA GV+ AA+RKL ELG+ + V +D+FT + +I YK+ S D +WGEHE+D++L + +D +++N P+EV +YKYV++E+L +L + D G+ +K++PWFRL+ N L WW++L L +++ TIH+ Sbjct: 94 SHPLWIVGSELVEENAQGVKIAAKRKLNHELGVPLDQVNIDDFTFMTKIHYKSESKEDPQWGEHEIDHILIMQKDGITINAEPNEVMDYKYVSQEELDQLFKDEDEGK--VKVTPWFRLIALNHLKPWWNNL--NNLKPLVEPTNTIHR 238
BLAST of CF832603 vs. ExPASy Swiss-Prot
Match: IDI1_YEAST (Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae GN=IDI1 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.615e-21 Identity = 58/155 (37.42%), Postives = 91/155 (58.71%), Query Frame = -1 Query: 307 SHPLYRESEL-----IEENALGVRNAAQRKLLDELGICAEDVPV-DEFTPLGRILYKAPSDGKWGEHELDYLLF----IVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 741 SHPL + EL +++ G AA RKL ELGI ++ +F L RI Y APS+ WGEHE+DY+LF +++VNPN +EV ++K+V+ LK + + K +PWF+++ +N+LF WW+ L+ L+EV + + IH++ Sbjct: 140 SHPLCIDDELGLKGKLDDKIKGAITAAVRKLDHELGIPEDETKTRGKFHFLNRIHYMAPSNEPWGEHEIDYILFYKINAKENLTVNPNVNEVRDFKWVSPNDLKTMF-----ADPSYKFTPWFKIICENYLFNWWEQLD--DLSEVENDRQIHRM 287 The following BLAST results are available for this feature:
BLAST of CF832603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832603 ID=CF832603; Name=CF832603; organism=Citrus sinensis; type=EST; length=741bpback to top |