CF832667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_CYAPA (50S ribosomal protein L22, cyanelle OS=Cyanophora paradoxa GN=rpl22 PE=3 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 7.076e-27 Identity = 58/111 (52.25%), Postives = 81/111 (72.97%), Query Frame = -3 Query: 124 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSL 456 EV A A+Y+ S KVRR++DQIRG+SY+E +M+L +MPY+AC I K++ SAAAN GFN+ L+I+K V++ + KR RP+AQGR + I +PTCHITV ++D SL Sbjct: 4 EVKAIAKYVRTSPQKVRRILDQIRGKSYKEAVMLLSVMPYKACSIILKIVDSAAANAQVTKGFNKNKLIISKTFVDKGPTLKRFRPRAQGRGYKILKPTCHITVQVQDQSL 114
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SYNJA (50S ribosomal protein L22 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplV PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.207e-26 Identity = 55/107 (51.40%), Postives = 78/107 (72.90%), Query Frame = -3 Query: 136 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLR 456 E+ A ARY+ MS +KVRRV++QIRGR+Y + L++LE MPY AC P+ K++ SA AN HN G + LVI+KA ++ + KR RP+AQGR + I++ TCHIT+ +R Sbjct: 7 EIKAVARYIRMSPYKVRRVLNQIRGRTYADALILLEFMPYAACEPVRKVLRSAVANAEHNNGLDPRDLVISKAYADQGPTLKRFRPRAQGRAYPIRKRTCHITIAVR 113
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_CUSGR (50S ribosomal protein L22, plastid OS=Cuscuta gronovii GN=rpl22 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.207e-26 Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = -3 Query: 127 KAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 462 K E ++ +SA K RRVID+IRGRSYEETL+ILEL+PYRA YPIFK + AA+N + +L I+KAEVNE + K+ +P+A+GR + IK+ TCHIT+VL D+S Sbjct: 6 KPETYVFSQNFPISADKARRVIDRIRGRSYEETLVILELLPYRAAYPIFKFVCFAASNASSTSTSKKENLFISKAEVNERPAIKKLKPRARGRSYPIKKATCHITIVLTDLS 117
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_BRADI (50S ribosomal protein L22, chloroplastic OS=Brachypodium distachyon GN=rpl22 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.207e-26 Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = -3 Query: 139 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 465 K V + + +HMS K +RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T K+ RP+A+GR IK+ CHIT+ L Sbjct: 34 KFERVFKAQKRIHMSVFKAQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANAAHYRDFDKANLFITKAEVSRSTIMKKFRPRARGRSFPIKKSMCHITIAL 142
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_ACAM1 (50S ribosomal protein L22 OS=Acaryochloris marina (strain MBIC 11017) GN=rplV PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.576e-26 Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = -3 Query: 139 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 447 A A+Y+ MS KVRRV+DQIRGRSY E L++LE MPYRAC P+ K++ SA AN N G + LV++ A ++ KR RP+AQGR + I++PTCHIT+ + Sbjct: 13 AKAKYIRMSPRKVRRVLDQIRGRSYREALIVLEFMPYRACEPVLKVLRSAVANAETNRGLDPVDLVVSHAYADQGPRLKRFRPRAQGRAYQIQKPTCHITIAV 115
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_RHDSA (50S ribosomal protein L22, chloroplastic OS=Rhodomonas salina GN=rpl22 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.059e-26 Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = -3 Query: 130 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDM 465 K+ E A A+Y+ MS KVRRV+ QIRGRSY+E LMILE MPY AC P+ +L+ SAAAN +N G + +++ A + KR RP+AQGR IK+PTCHITV L+++ Sbjct: 6 KQTEARAIAKYIRMSPFKVRRVLKQIRGRSYKEALMILEFMPYAACKPVLQLLQSAAANAQNNYGLQKDQMIVNYAYADPGPVLKRFRPRAQGRGFKIKKPTCHITVSLKEV 117
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_CRYJA (50S ribosomal protein L22, chloroplastic OS=Cryptomeria japonica GN=rpl22 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.059e-26 Identity = 59/119 (49.58%), Postives = 82/119 (68.91%), Query Frame = -3 Query: 127 NRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 483 NR T K + A A+++ MS++K RRV Q+RG +Y E L IL MP+RACYPI K++ SAAAN HNMG ++ L + AEVNE KR RP+A+GR + I++PTCHI++ L D++ Sbjct: 2 NRASTRK---IRAVAKHVRMSSNKARRVAHQLRGCTYMEALSILNWMPHRACYPILKVLRSAAANAYHNMGIDKGFLFVLMAEVNEGPIFKRFRPRARGRGYPIQKPTCHISITLEDVT 117
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_SORBI (50S ribosomal protein L22, chloroplastic OS=Sorghum bicolor GN=rpl22 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.689e-26 Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = -3 Query: 139 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 465 K V + + +HMS K +RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++ +L I KAEV+ +T K+ RP+A+GR + IK+ C+IT+VL Sbjct: 33 KFERVFKAQKRIHMSVFKAQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKTNLFITKAEVSRSTIMKKFRPRARGRSYSIKKTMCNITIVL 141
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_SACOF (50S ribosomal protein L22, chloroplastic OS=Saccharum officinarum GN=rpl22 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.689e-26 Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = -3 Query: 139 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 465 K V + + +HMS K +RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++ +L I KAEV+ +T K+ RP+A+GR + IK+ C+IT+VL Sbjct: 33 KFERVFKAQKRIHMSVFKAQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKTNLFITKAEVSRSTIMKKFRPRARGRSYSIKKTMCNITIVL 141
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_SACHY (50S ribosomal protein L22, chloroplastic OS=Saccharum hybrid GN=rpl22 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.689e-26 Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = -3 Query: 139 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 465 K V + + +HMS K +RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++ +L I KAEV+ +T K+ RP+A+GR + IK+ C+IT+VL Sbjct: 33 KFERVFKAQKRIHMSVFKAQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKTNLFITKAEVSRSTIMKKFRPRARGRSYSIKKTMCNITIVL 141 The following BLAST results are available for this feature:
BLAST of CF832667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832667 ID=CF832667; Name=CF832667; organism=Citrus sinensis; type=EST; length=500bpback to top |