CF832667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_CHAGL (50S ribosomal protein L22, chloroplastic OS=Chaetosphaeridium globosum GN=rpl22 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.973e-25 Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = -3 Query: 136 NKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLR 477 N TN + A + + +S HK+R+VIDQIRGRSYE+ LMILE MPY+AC + KL+ S AAN HN G N++ L I K + KR +P+AQGR + I +PTC++ +V++ Sbjct: 3 NNTNSNISIKAVGKKIRISPHKMRKVIDQIRGRSYEQALMILEFMPYKACNYVLKLLSSVAANANHNFGLNKSDLFIEKIIADGGPKLKRFQPRAQGRGYPILKPTCNLMIVVK 116
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_PROM4 (50S ribosomal protein L22 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplV PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.883e-25 Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = -3 Query: 145 NKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 477 + ++K A RY+ SA KVRRV+DQIRGR+Y + L++LE MPYR+ PI K++ SA AN +NMG + ASLVI +A + A S KR RP+AQGR IK+ TCHI++ Sbjct: 4 SSSSKTKFAQAHGRYIRGSASKVRRVLDQIRGRTYRDALIMLEFMPYRSTGPITKVLRSAVANAENNMGLDPASLVITRATADMAPSMKRYRPRAQGRAFAIKKQTCHISI 114
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_ADICA (50S ribosomal protein L22, chloroplastic OS=Adiantum capillus-veneris GN=rpl22 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 8.650e-25 Identity = 54/116 (46.55%), Postives = 84/116 (72.41%), Query Frame = -3 Query: 121 KAEVSASA--RYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLD 462 K++V A A + + +S K++R+ID+IR SYEE L++LE MPYRACYP+ +L+ SAAAN +N+G N++ L ++KA V+ + +R RP+AQGR + IK+PTC +T+ L S++ Sbjct: 6 KSQVGAQALGKNVRVSVTKMQRIIDRIRNCSYEEALVLLEFMPYRACYPVSQLVLSAAANASNNLGLNKSDLFVSKAWVDNSKYLRRFRPRAQGRGYPIKKPTCKVTIQLSSKSIE 121
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_PROMM (50S ribosomal protein L22 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplV PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.927e-24 Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = -3 Query: 139 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 447 A R++ S KVRRV+DQIRGR+Y + L++LE MPYR+ PI K++ SA AN HN+G + ASLVIA+A + S KR RP+AQGR IK+ TCHI++ + Sbjct: 14 AHGRFIRGSVSKVRRVLDQIRGRTYRDALIMLEFMPYRSTGPITKVLRSAVANAEHNLGLDPASLVIAQASADMGPSMKRYRPRAQGRAFAIKKQTCHISIAV 116
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_PROM3 (50S ribosomal protein L22 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplV PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.927e-24 Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = -3 Query: 139 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 447 A R++ S KVRRV+DQIRGR+Y + L++LE MPYR+ PI K++ SA AN HN+G + ASLVIA+A + S KR RP+AQGR IK+ TCHI++ + Sbjct: 14 AHGRFIRGSVSKVRRVLDQIRGRTYRDALIMLEFMPYRSTGPITKVLRSAVANAEHNLGLDPASLVIAQASADMGPSMKRYRPRAQGRAFAIKKQTCHISIAV 116
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SYNS9 (50S ribosomal protein L22 OS=Synechococcus sp. (strain CC9902) GN=rplV PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.287e-24 Identity = 54/113 (47.79%), Postives = 76/113 (67.26%), Query Frame = -3 Query: 139 NKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 477 + T+ A A R++ S KVRRV+DQIRGR+Y + L++LE MPYR+ PI K++ SA AN +N+G + ASLVI+ A + S KR RP+AQGR IK+ TCHI++ + Sbjct: 3 SSTSTAATAQAHGRFIRGSVSKVRRVLDQIRGRTYRDALIMLEFMPYRSTGPITKVLRSAVANAENNLGLDPASLVISSASADMGPSMKRYRPRAQGRAFQIKKQTCHISIAV 115
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SYNS3 (50S ribosomal protein L22 OS=Synechococcus sp. (strain CC9311) GN=rplV PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.287e-24 Identity = 52/103 (50.49%), Postives = 74/103 (71.84%), Query Frame = -3 Query: 139 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 447 A R++ S KVRRV+DQIRGR+Y + L++LE MPYR+ PI K++ SA AN HN+G + ASL+I++A + S KR RP+AQGR + IK+ TCHI++ + Sbjct: 13 AHGRFIRGSVSKVRRVLDQIRGRTYRDALIMLEFMPYRSTGPITKVLRSAVANAEHNLGLDPASLIISQATADMGPSMKRYRPRAQGRAYAIKKQTCHISIAV 115
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SYNPX (50S ribosomal protein L22 OS=Synechococcus sp. (strain WH8102) GN=rplV PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.293e-24 Identity = 53/103 (51.46%), Postives = 72/103 (69.90%), Query Frame = -3 Query: 139 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 447 A R++ S KVRRV+DQIRGR+Y + L++LE MPYR+ PI K++ SA AN HN+G + ASLVI+ A + S KR RP+AQGR IK+ TCHI++ + Sbjct: 13 AHGRFIRGSVSKVRRVLDQIRGRTYRDALIMLEFMPYRSTGPITKVLRSAVANAEHNLGLDPASLVISSASADMGPSMKRYRPRAQGRAFQIKKQTCHISIAV 115
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_PROMS (50S ribosomal protein L22 OS=Prochlorococcus marinus (strain AS9601) GN=rplV PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.293e-24 Identity = 57/110 (51.82%), Postives = 75/110 (68.18%), Query Frame = -3 Query: 145 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 474 +T KKA A Y+ SA KVRRV+DQIRGRSY + L++LE MPYR+ PI K++ SA AN HN+G + ++LVI+ A N KR RP+AQGR IK+ TCHI++ Sbjct: 6 ETTKKA--IAHGNYVRGSASKVRRVLDQIRGRSYRDALIMLEFMPYRSTDPITKVLRSAVANAEHNLGMDPSTLVISSAWANSGPVMKRYRPRAQGRAFSIKKQTCHISI 113
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SYNSC (50S ribosomal protein L22 OS=Synechococcus sp. (strain CC9605) GN=rplV PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 5.607e-24 Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = -3 Query: 139 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 447 A R++ S KVRRV+DQIRGR+Y + L++LE MPYR+ PI K++ SA AN HN+G + +SLVI+ A + S KR RP+AQGR + IK+ TCHI++ + Sbjct: 13 AHGRFIRGSVSKVRRVLDQIRGRTYRDALIMLEFMPYRSTGPITKVLRSAVANAEHNLGLDPSSLVISSATADMGPSMKRYRPRAQGRAYQIKKQTCHISIAV 115 The following BLAST results are available for this feature:
BLAST of CF832667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832667 ID=CF832667; Name=CF832667; organism=Citrus sinensis; type=EST; length=500bpback to top |