CF832667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_PANGI (50S ribosomal protein L22, chloroplastic OS=Panax ginseng GN=rpl22 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.125e-40 Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = -3 Query: 118 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 465 +K V A +YL MSAHK RRVIDQIRGRSYEETLMILELMPYRACYPIFKL+YSAAAN +NM NE++LVI+KAEV+E T K+ +P+A+GR IKRPTCHI++V++D+SLD+ Sbjct: 5 RKTTVYALGQYLSMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANASYNMDSNESNLVISKAEVSEGTIVKKLKPRARGRSFPIKRPTCHISIVVKDISLDE 120
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_ATRBE (50S ribosomal protein L22, chloroplastic OS=Atropa belladonna GN=rpl22 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.125e-40 Identity = 81/118 (68.64%), Postives = 98/118 (83.05%), Query Frame = -3 Query: 112 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 465 KK EV A ++ MSA K RRVIDQIRGRSYEETLMILELMPYRACYPI KL+YSAAAN +NMG +EA+LVI+KAEVN T+ K+ +P+A+GR IKR TCHIT+V++D+SL+DEY Sbjct: 5 KKTEVYALGEHISMSADKARRVIDQIRGRSYEETLMILELMPYRACYPILKLVYSAAANASYNMGSSEANLVISKAEVNGGTTVKKLKPRARGRSFPIKRSTCHITIVMKDISLNDEY 122
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_AETCO (50S ribosomal protein L22, chloroplastic OS=Aethionema cordifolium GN=rpl22 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.125e-40 Identity = 78/123 (63.41%), Postives = 93/123 (75.61%), Query Frame = -3 Query: 112 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 480 + K V A +Y+ MS HK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR + IKRPTCHIT+VL D S D +Y Sbjct: 4 KKKKKSYTSVYALGQYISMSTHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRPTCHITIVLEDRSFDQQY 126
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_GOSBA (50S ribosomal protein L22, chloroplastic OS=Gossypium barbadense GN=rpl22 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.469e-40 Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = -3 Query: 121 NNRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLD 486 + RN EV A +++ MSAHK RR+IDQIRGRSYEETLMILELMPYRACYPI KL+YSAAAN HN GFNEASL+I++ VNE T+ KR P+A+GR ++IKRPTCHIT+ L+D+ + Sbjct: 7 HRRNPYTTSDEVYALGQHICMSAHKARRIIDQIRGRSYEETLMILELMPYRACYPILKLVYSAAANARHNRGFNEASLIISQVAVNEGTTLKRLNPRARGRSYLIKRPTCHITIALKDLEFE 128
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_CUCSA (50S ribosomal protein L22, chloroplastic OS=Cucumis sativus GN=rpl22 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.918e-40 Identity = 81/121 (66.94%), Postives = 100/121 (82.64%), Query Frame = -3 Query: 115 KTNK-KAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDE 474 KT K + EV A +++ MS HK RRVIDQIRGRSYEET+MILELMPYRACYPI KL+YSAAAN HNMGFNE LVI+KAEVN+ T+ K+ +P+AQGR + IKRPTC IT+VL++ S+++E Sbjct: 3 KTKKNRYEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRAQGRSYPIKRPTCSITIVLKNTSVNEE 123
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_DAUCA (50S ribosomal protein L22, chloroplastic OS=Daucus carota GN=rpl22 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 5.581e-40 Identity = 78/118 (66.10%), Postives = 98/118 (83.05%), Query Frame = -3 Query: 118 TNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 471 T K EV A +++ MSAHK RRV+DQIRGRSYEETLMILELMPYRACYPI KL+YSAAAN +NM NE++LVI+KAEV+E T+ K+ +P+A+GR IKRPTCHI +V++D+SLD+ Sbjct: 6 TKIKTEVYALGQHISMSAHKARRVVDQIRGRSYEETLMILELMPYRACYPILKLVYSAAANANYNMDSNESNLVISKAEVSEGTATKKLKPRARGRSFTIKRPTCHIAIVVKDISLDE 123
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_ARATH (50S ribosomal protein L22, chloroplastic OS=Arabidopsis thaliana GN=rpl22 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 5.581e-40 Identity = 78/123 (63.41%), Postives = 94/123 (76.42%), Query Frame = -3 Query: 112 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 480 + K EV A +Y+ MSAHK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR + IKR TCHIT+VL D+S +Y Sbjct: 4 KRKKKSYTEVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYQQY 126
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_IPOPU (50S ribosomal protein L22, chloroplastic OS=Ipomoea purpurea GN=rpl22 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.289e-40 Identity = 81/120 (67.50%), Postives = 99/120 (82.50%), Query Frame = -3 Query: 106 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEYAV 465 KK EV A +++ MSA K RRVIDQIRGRSYEETLMILELMPYRA YPIFKL+YSAAAN + M NEA+LVI+KAEVNE T+ K+ +P+A+GR + IKR TCHIT+VL+D+SLDD ++ Sbjct: 8 KKPEVYALGQHISMSADKARRVIDQIRGRSYEETLMILELMPYRAGYPIFKLVYSAAANASYTMASNEANLVISKAEVNEGTTVKKFKPRARGRSYPIKRTTCHITIVLKDISLDDSESI 127
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_AETGR (50S ribosomal protein L22, chloroplastic OS=Aethionema grandiflora GN=rpl22 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.289e-40 Identity = 77/123 (62.60%), Postives = 93/123 (75.61%), Query Frame = -3 Query: 112 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 480 + K V A +Y+ MS HK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR + IKRPTCHIT+VL D+S +Y Sbjct: 4 KKKKKSYTSVYALGQYISMSTHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRPTCHITIVLEDISFYQQY 126
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_LOBMA (50S ribosomal protein L22, chloroplastic OS=Lobularia maritima GN=rpl22 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.243e-39 Identity = 79/123 (64.23%), Postives = 96/123 (78.05%), Query Frame = -3 Query: 112 KTNKKAEVSASA--RYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 474 K NKK+ S A +Y+ MS HK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR + IKR TCHIT+VL D+S ++Y Sbjct: 4 KKNKKSYTSVYALGQYISMSTHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYEQY 126 The following BLAST results are available for this feature:
BLAST of CF832667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832667 ID=CF832667; Name=CF832667; organism=Citrus sinensis; type=EST; length=500bpback to top |