CF832667

Overview
NameCF832667
Unique NameCF832667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length500
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_HAEDU (50S ribosomal protein L22 OS=Haemophilus ducreyi GN=rplV PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  RY   SA K R V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L +AK  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRYARTSAQKARLVADLIRGKKVAQALEILTFTNKKASALVKKVLESAIANAEHNDGADVDDLKVAKIFVDEGPSMKRVMPRAKGRADRILKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_GEOTN (50S ribosomal protein L22 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplV PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            +  A AR + ++  K R VID IRG+   E   IL   P  A   I K++ SA AN  HN   +  +LV+++A VNE  + KR RP+A+G+   I + T HIT+V+ +
Sbjct:    2 QAKAVARTVRIAPRKARLVIDLIRGKKVGEAFAILRHTPKAASPIIEKVLKSAVANAEHNYDMDINNLVVSQAYVNEGPTLKRFRPRARGQASAINKRTSHITIVVSE 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_CLOTE (50S ribosomal protein L22 OS=Clostridium tetani GN=rplV PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A A+Y+ MS  KV  V+D +RG+   E   IL   P  A   I K++ SA AN  +N+  + + L +A+A   +  + KR +P AQGR   I + T H+T+V+++
Sbjct:    2 EAKAIAKYVRMSPRKVGVVLDLVRGKDVNEAFAILNYTPREAAVVINKVLKSAVANAENNLELDPSRLYVAEAYACQGPTLKRYQPHAQGRAFRINKRTSHVTLVVKE 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_CLOB8 (50S ribosomal protein L22 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=rplV PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 40/108 (37.04%), Postives = 63/108 (58.33%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A A+Y+ MS  KV  ++D IRG+   E   IL+  P  A   I K++ SA AN  +N+  N  +L +++  V + ++ KR +P AQGR   I + T +ITVV+++
Sbjct:    2 EARAIAKYIRMSPTKVGVILDLIRGKQVNEAFAILQYTPREAAVVINKVLKSAVANAENNLELNADNLYVSECFVGQGSTLKRFQPHAQGRAFKILKKTSNITVVVKE 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_BACCR (50S ribosomal protein L22 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplV PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            +  A AR + ++  KVR V+D IRG+   E + IL   P  A   + K++ SA AN  HN   +  +LV+ K  V+E  + KR RP+A GR   I + T HITVV+ +
Sbjct:    2 QAKAVARTVRIAPRKVRLVVDLIRGKQVGEAIAILNHTPKTASPVVEKVLKSAIANAEHNYEMDINNLVVEKVFVDEGPTLKRFRPRAMGRASQINKRTSHITVVVSE 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_BACCQ (50S ribosomal protein L22 OS=Bacillus cereus (strain Q1) GN=rplV PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            +  A AR + ++  KVR V+D IRG+   E + IL   P  A   + K++ SA AN  HN   +  +LV+ K  V+E  + KR RP+A GR   I + T HITVV+ +
Sbjct:    2 QAKAVARTVRIAPRKVRLVVDLIRGKQVGEAIAILNHTPKTASPVVEKVLKSAIANAEHNYEMDINNLVVEKVFVDEGPTLKRFRPRAMGRASQINKRTSHITVVVSE 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_BACC7 (50S ribosomal protein L22 OS=Bacillus cereus (strain AH187) GN=rplV PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            +  A AR + ++  KVR V+D IRG+   E + IL   P  A   + K++ SA AN  HN   +  +LV+ K  V+E  + KR RP+A GR   I + T HITVV+ +
Sbjct:    2 QAKAVARTVRIAPRKVRLVVDLIRGKQVGEAIAILNHTPKTASPVVEKVLKSAIANAEHNYEMDINNLVVEKVFVDEGPTLKRFRPRAMGRASQINKRTSHITVVVSE 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_BACC4 (50S ribosomal protein L22 OS=Bacillus cereus (strain B4264) GN=rplV PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            +  A AR + ++  KVR V+D IRG+   E + IL   P  A   + K++ SA AN  HN   +  +LV+ K  V+E  + KR RP+A GR   I + T HITVV+ +
Sbjct:    2 QAKAVARTVRIAPRKVRLVVDLIRGKQVGEAIAILNHTPKTASPVVEKVLKSAIANAEHNYEMDINNLVVEKVFVDEGPTLKRFRPRAMGRASQINKRTSHITVVVSE 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_BACC2 (50S ribosomal protein L22 OS=Bacillus cereus (strain G9842) GN=rplV PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            +  A AR + ++  KVR V+D IRG+   E + IL   P  A   + K++ SA AN  HN   +  +LV+ K  V+E  + KR RP+A GR   I + T HITVV+ +
Sbjct:    2 QAKAVARTVRIAPRKVRLVVDLIRGKQVGEAIAILNHTPKTASPVVEKVLKSAIANAEHNYEMDINNLVVEKVFVDEGPTLKRFRPRAMGRASQINKRTSHITVVVSE 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_BACC1 (50S ribosomal protein L22 OS=Bacillus cereus (strain ATCC 10987) GN=rplV PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            +  A AR + ++  KVR V+D IRG+   E + IL   P  A   + K++ SA AN  HN   +  +LV+ K  V+E  + KR RP+A GR   I + T HITVV+ +
Sbjct:    2 QAKAVARTVRIAPRKVRLVVDLIRGKQVGEAIAILNHTPKTASPVVEKVLKSAIANAEHNYEMDINNLVVEKVFVDEGPTLKRFRPRAMGRASQINKRTSHITVVVSE 109
The following BLAST results are available for this feature:
BLAST of CF832667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL22_HAEDU3.410e-1341.6750S ribosomal protein L22 OS=Haemophilus ducreyi G... [more]
RL22_GEOTN3.410e-1338.8950S ribosomal protein L22 OS=Geobacillus thermoden... [more]
RL22_CLOTE3.410e-1336.1150S ribosomal protein L22 OS=Clostridium tetani GN... [more]
RL22_CLOB83.410e-1337.0450S ribosomal protein L22 OS=Clostridium beijerinc... [more]
RL22_BACCR3.410e-1338.8950S ribosomal protein L22 OS=Bacillus cereus (stra... [more]
RL22_BACCQ3.410e-1338.8950S ribosomal protein L22 OS=Bacillus cereus (stra... [more]
RL22_BACC73.410e-1338.8950S ribosomal protein L22 OS=Bacillus cereus (stra... [more]
RL22_BACC43.410e-1338.8950S ribosomal protein L22 OS=Bacillus cereus (stra... [more]
RL22_BACC23.410e-1338.8950S ribosomal protein L22 OS=Bacillus cereus (stra... [more]
RL22_BACC13.410e-1338.8950S ribosomal protein L22 OS=Bacillus cereus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02D21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832667 ID=CF832667; Name=CF832667; organism=Citrus sinensis; type=EST; length=500bp
TTTTTTTTTTTTTTTAAAAAAACAAAGAACGGGACGTTACTCATTCCAAA
AACATCAAAAGATAACTAAGCAAACTTGAAATACAAGTGAAATCTGTAAT
TAGGAAACCGCATATTCATCATCTAAAGACATGTCTCTTAACACAACAGT
GATATGACAAGTGGGTCTTTTGATCATATGAACCCTCCCTTGAGCTTTAG
GTCTCGGTCTTTTAGCAGAAGTAGCCTCGTTCACTTCCGCTTTGGCGATG
ACTAAACTGGCCTCGTTGAAGCCCATATTGTGAACACCATTTGCCGCCGC
AGAATAAATCAGTTTGAAAATGGGATAACAGGCCCGATAAGGCATGAGCT
CCAGTATCATAAGCGTCTCCTCGTAAGAACGTCCGCGAATCTGATCAATT
ACCCTTCGGACTTTGTGAGCAGACATGTGCAGATATCGAGCTGAAGCAGA
CACTTCTGCCTTCTTGTTGGTCTTGTTTCTGTTGTTCGGCGGCGATATTC
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