CF832667

Overview
NameCF832667
Unique NameCF832667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length500
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHESW (50S ribosomal protein L22 OS=Shewanella sp. (strain W3-18-1) GN=rplV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            EV A  R+   SA K R V DQIRG    + L IL   P +A   + K++ SA AN  HN G +   L +    V+E  + KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHESR (50S ribosomal protein L22 OS=Shewanella sp. (strain MR-7) GN=rplV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            EV A  R+   SA K R V DQIRG    + L IL   P +A   + K++ SA AN  HN G +   L +    V+E  + KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHESM (50S ribosomal protein L22 OS=Shewanella sp. (strain MR-4) GN=rplV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            EV A  R+   SA K R V DQIRG    + L IL   P +A   + K++ SA AN  HN G +   L +    V+E  + KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHESA (50S ribosomal protein L22 OS=Shewanella sp. (strain ANA-3) GN=rplV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            EV A  R+   SA K R V DQIRG    + L IL   P +A   + K++ SA AN  HN G +   L +    V+E  + KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHEPC (50S ribosomal protein L22 OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=rplV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            EV A  R+   SA K R V DQIRG    + L IL   P +A   + K++ SA AN  HN G +   L +    V+E  + KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHEON (50S ribosomal protein L22 OS=Shewanella oneidensis GN=rplV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            EV A  R+   SA K R V DQIRG    + L IL   P +A   + K++ SA AN  HN G +   L +    V+E  + KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHEDO (50S ribosomal protein L22 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rplV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            EV A  R+   SA K R V DQIRG    + L IL   P +A   + K++ SA AN  HN G +   L +    V+E  + KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 EVLAKHRFARTSAQKARLVADQIRGLPVSKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELRVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVAD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHEB9 (50S ribosomal protein L22 OS=Shewanella baltica (strain OS195) GN=rplV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            EV A  R+   SA K R V DQIRG    + L IL   P +A   + K++ SA AN  HN G +   L +    V+E  + KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHEB8 (50S ribosomal protein L22 OS=Shewanella baltica (strain OS185) GN=rplV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            EV A  R+   SA K R V DQIRG    + L IL   P +A   + K++ SA AN  HN G +   L +    V+E  + KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHEB5 (50S ribosomal protein L22 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=rplV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            EV A  R+   SA K R V DQIRG    + L IL   P +A   + K++ SA AN  HN G +   L +    V+E  + KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
The following BLAST results are available for this feature:
BLAST of CF832667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL22_SHESW4.453e-1340.7450S ribosomal protein L22 OS=Shewanella sp. (strai... [more]
RL22_SHESR4.453e-1340.7450S ribosomal protein L22 OS=Shewanella sp. (strai... [more]
RL22_SHESM4.453e-1340.7450S ribosomal protein L22 OS=Shewanella sp. (strai... [more]
RL22_SHESA4.453e-1340.7450S ribosomal protein L22 OS=Shewanella sp. (strai... [more]
RL22_SHEPC4.453e-1340.7450S ribosomal protein L22 OS=Shewanella putrefacie... [more]
RL22_SHEON4.453e-1340.7450S ribosomal protein L22 OS=Shewanella oneidensis... [more]
RL22_SHEDO4.453e-1340.7450S ribosomal protein L22 OS=Shewanella denitrific... [more]
RL22_SHEB94.453e-1340.7450S ribosomal protein L22 OS=Shewanella baltica (s... [more]
RL22_SHEB84.453e-1340.7450S ribosomal protein L22 OS=Shewanella baltica (s... [more]
RL22_SHEB54.453e-1340.7450S ribosomal protein L22 OS=Shewanella baltica (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02D21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832667 ID=CF832667; Name=CF832667; organism=Citrus sinensis; type=EST; length=500bp
TTTTTTTTTTTTTTTAAAAAAACAAAGAACGGGACGTTACTCATTCCAAA
AACATCAAAAGATAACTAAGCAAACTTGAAATACAAGTGAAATCTGTAAT
TAGGAAACCGCATATTCATCATCTAAAGACATGTCTCTTAACACAACAGT
GATATGACAAGTGGGTCTTTTGATCATATGAACCCTCCCTTGAGCTTTAG
GTCTCGGTCTTTTAGCAGAAGTAGCCTCGTTCACTTCCGCTTTGGCGATG
ACTAAACTGGCCTCGTTGAAGCCCATATTGTGAACACCATTTGCCGCCGC
AGAATAAATCAGTTTGAAAATGGGATAACAGGCCCGATAAGGCATGAGCT
CCAGTATCATAAGCGTCTCCTCGTAAGAACGTCCGCGAATCTGATCAATT
ACCCTTCGGACTTTGTGAGCAGACATGTGCAGATATCGAGCTGAAGCAGA
CACTTCTGCCTTCTTGTTGGTCTTGTTTCTGTTGTTCGGCGGCGATATTC
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