CF832667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_ALKMQ (50S ribosomal protein L22 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplV PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13 Identity = 37/108 (34.26%), Postives = 63/108 (58.33%), Query Frame = -3 Query: 133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456 E A A+++ ++ KV+ V+D +RG+ +E L IL+ P A + KLI SA AN +N + L +++ N+ + KR RP+A GR I++ T HI +V+++ Sbjct: 2 EARAIAKFVRIAPRKVKIVVDLVRGKQVDEALAILKHTPKGASPVVIKLIQSAVANAENNHEMDREQLFVSEVYANQGPTMKRFRPRAMGRATTIRKRTSHIGIVVKE 109
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_ALISL (50S ribosomal protein L22 OS=Aliivibrio salmonicida (strain LFI1238) GN=rplV PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13 Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = -3 Query: 133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456 E A R+ +S K R V DQIRG+S ++ L IL +A I K++ SA AN HN G + L +AK V+E KR P+A+GR I + + HIT+V+ D Sbjct: 2 EAIAKHRFASISPQKARLVADQIRGKSVDQALEILTFSNKKAAVIIKKVVESAIANAEHNEGADIDDLNVAKIFVDEGPIMKRIMPRAKGRADRILKRSSHITIVVAD 109
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHIFL (50S ribosomal protein L22 OS=Shigella flexneri GN=rplV PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 Query: 133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456 E A R+ SA KVR V D IRG+ + L IL +A + K++ SA AN HN G + L + K V+E S KR P+A+GR I + T HITVV+ D Sbjct: 2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVQVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHIF8 (50S ribosomal protein L22 OS=Shigella flexneri serotype 5b (strain 8401) GN=rplV PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 Query: 133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456 E A R+ SA KVR V D IRG+ + L IL +A + K++ SA AN HN G + L + K V+E S KR P+A+GR I + T HITVV+ D Sbjct: 2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVQVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_PSEU5 (50S ribosomal protein L22 OS=Pseudomonas stutzeri (strain A1501) GN=rplV PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = -3 Query: 133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456 EV+A +SA K R V DQIRG+ + L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGDALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_PROAC (50S ribosomal protein L22 OS=Propionibacterium acnes GN=rplV PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 139 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 447 A AR++ MSA K RRVI+ +RG + + +L+ P A PI K+I SA AN G L I++A V+E + +R RP+A+G I + + HITVV+ Sbjct: 22 AIARHVRMSASKCRRVINLVRGMDAVDAVTMLKFQPQAAAEPIRKVIASAMANAEQTEGLRADDLYISQAFVDEGITMRRIRPRAKGSASRILKRSAHITVVV 124
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_PETMO (50S ribosomal protein L22 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rplV PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 36/112 (32.14%), Postives = 60/112 (53.57%), Query Frame = -3 Query: 121 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLD 456 E A +Y+ +S K R + + IR + E L IL P ++ ++K + SA AN +N G N +L +++ VNE KR P++ GR ++++ HI + +RD S D Sbjct: 37 EARAVTKYVRISPRKARSMANSIRNKDISEALQILTFSPKKSARILYKTLMSAIANAENNFGLNAENLYVSEIMVNEGPRLKRLWPRSHGRADILQKRMSHIYITVRDKSAD 148
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_METSB (50S ribosomal protein L22 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplV PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = -3 Query: 124 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSL 465 K E A AR L +S K+ + IRG+ E L LE RA + + K + SA AN +N LV+A+A V +A KR P+A+GR I++P H+T+VLR++++ Sbjct: 11 KDNEAKAVARMLRISPQKLNLLAQLIRGKKVERALAELEFSRKRAAFDVRKTLESAIANAENNHSLEVDDLVVAEAFVGKALVMKRFSPRARGRSGKIQKPFSHLTIVLREVAV 124
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_DESOH (50S ribosomal protein L22 OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=rplV PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = -3 Query: 133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456 +VSA+ARYL + KVR ++D I+G+S E+ L L MP + + K + SA AN + LVI V++ + KR RP+A+GR I + T HITVVL + Sbjct: 3 QVSATARYLRIGPQKVRMLVDGIKGKSVEKGLNTLRFMPNKGAGLVEKALRSAVAN-AEEKNMDVDGLVILNVLVDQGPTLKRFRPRARGRATRILKRTSHITVVLAE 109
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_BACWK (50S ribosomal protein L22 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplV PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = -3 Query: 133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456 + A R + ++ KVR V+D IRG+ E + IL P A + K++ SA AN HN + +LV+ K V+E + KR RP+A GR I + T HITVV+ + Sbjct: 2 QAKAVVRTVRIAPRKVRLVVDLIRGKQVGEAIAILNHTPKTASPVVEKVLKSAIANAEHNYEMDINNLVVEKVFVDEGPTLKRFRPRAMGRASQINKRTSHITVVVSE 109 The following BLAST results are available for this feature:
BLAST of CF832667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832667 ID=CF832667; Name=CF832667; organism=Citrus sinensis; type=EST; length=500bpback to top |