CF832667

Overview
NameCF832667
Unique NameCF832667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length500
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SHIB3 (50S ribosomal protein L22 OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=rplV PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  R+   SA KVR V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L + K  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SALTY (50S ribosomal protein L22 OS=Salmonella typhimurium GN=rplV PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  R+   SA KVR V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L + K  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SALTI (50S ribosomal protein L22 OS=Salmonella typhi GN=rplV PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  R+   SA KVR V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L + K  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SALSV (50S ribosomal protein L22 OS=Salmonella schwarzengrund (strain CVM19633) GN=rplV PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  R+   SA KVR V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L + K  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SALPK (50S ribosomal protein L22 OS=Salmonella paratyphi A (strain AKU_12601) GN=rplV PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  R+   SA KVR V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L + K  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SALPC (50S ribosomal protein L22 OS=Salmonella paratyphi C (strain RKS4594) GN=rplV PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  R+   SA KVR V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L + K  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SALPB (50S ribosomal protein L22 OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=rplV PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  R+   SA KVR V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L + K  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SALPA (50S ribosomal protein L22 OS=Salmonella paratyphi A GN=rplV PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  R+   SA KVR V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L + K  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SALNS (50S ribosomal protein L22 OS=Salmonella newport (strain SL254) GN=rplV PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  R+   SA KVR V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L + K  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
[Close]
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SALHS (50S ribosomal protein L22 OS=Salmonella heidelberg (strain SL476) GN=rplV PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3 
Query:  133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456
            E  A  R+   SA KVR V D IRG+   + L IL     +A   + K++ SA AN  HN G +   L + K  V+E  S KR  P+A+GR   I + T HITVV+ D
Sbjct:    2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
The following BLAST results are available for this feature:
BLAST of CF832667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL22_SHIB31.692e-1240.7450S ribosomal protein L22 OS=Shigella boydii serot... [more]
RL22_SALTY1.692e-1240.7450S ribosomal protein L22 OS=Salmonella typhimuriu... [more]
RL22_SALTI1.692e-1240.7450S ribosomal protein L22 OS=Salmonella typhi GN=r... [more]
RL22_SALSV1.692e-1240.7450S ribosomal protein L22 OS=Salmonella schwarzeng... [more]
RL22_SALPK1.692e-1240.7450S ribosomal protein L22 OS=Salmonella paratyphi ... [more]
RL22_SALPC1.692e-1240.7450S ribosomal protein L22 OS=Salmonella paratyphi ... [more]
RL22_SALPB1.692e-1240.7450S ribosomal protein L22 OS=Salmonella paratyphi ... [more]
RL22_SALPA1.692e-1240.7450S ribosomal protein L22 OS=Salmonella paratyphi ... [more]
RL22_SALNS1.692e-1240.7450S ribosomal protein L22 OS=Salmonella newport (s... [more]
RL22_SALHS1.692e-1240.7450S ribosomal protein L22 OS=Salmonella heidelberg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02D21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832667 ID=CF832667; Name=CF832667; organism=Citrus sinensis; type=EST; length=500bp
TTTTTTTTTTTTTTTAAAAAAACAAAGAACGGGACGTTACTCATTCCAAA
AACATCAAAAGATAACTAAGCAAACTTGAAATACAAGTGAAATCTGTAAT
TAGGAAACCGCATATTCATCATCTAAAGACATGTCTCTTAACACAACAGT
GATATGACAAGTGGGTCTTTTGATCATATGAACCCTCCCTTGAGCTTTAG
GTCTCGGTCTTTTAGCAGAAGTAGCCTCGTTCACTTCCGCTTTGGCGATG
ACTAAACTGGCCTCGTTGAAGCCCATATTGTGAACACCATTTGCCGCCGC
AGAATAAATCAGTTTGAAAATGGGATAACAGGCCCGATAAGGCATGAGCT
CCAGTATCATAAGCGTCTCCTCGTAAGAACGTCCGCGAATCTGATCAATT
ACCCTTCGGACTTTGTGAGCAGACATGTGCAGATATCGAGCTGAAGCAGA
CACTTCTGCCTTCTTGTTGGTCTTGTTTCTGTTGTTCGGCGGCGATATTC
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