CF832667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_OENAR (50S ribosomal protein L22, chloroplastic OS=Oenothera argillicola GN=rpl22 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.164e-37 Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = -3 Query: 118 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 474 K EV A +Y+ MSA K RRVIDQIRGRSYEETLM+L LMPYRAC PI KL+ SAAAN HNM FNEA+LVI+KAEVNE T+ K+ +P+A+GR + I+RPTCHI +VL+D S D+ Sbjct: 3 KKKTYGEVYALGQYISMSAPKARRVIDQIRGRSYEETLMLLALMPYRACDPILKLVNSAAANARHNMSFNEATLVISKAEVNEGTTVKKLKPRARGRSYPIRRPTCHIRIVLQDTSFDE 121
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_NYMAL (50S ribosomal protein L22, chloroplastic OS=Nymphaea alba GN=rpl22 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.592e-37 Identity = 76/114 (66.67%), Postives = 88/114 (77.19%), Query Frame = -3 Query: 133 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 474 K E+ A AR++ MSA K RRVIDQIRG SYE+TLMILELMPYRACYPIFKL+YSAAAN HN G EA L I+KAEVNE KR +P+A+GR + IKRPTCHIT+VL + Sbjct: 3 KKTSGTEIRALARHIGMSAQKARRVIDQIRGCSYEQTLMILELMPYRACYPIFKLVYSAAANASHNRGLKEADLFISKAEVNEGVIVKRLKPRARGRSYPIKRPTCHITIVLSE 116
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_NUPAD (50S ribosomal protein L22, chloroplastic OS=Nuphar advena GN=rpl22 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.592e-37 Identity = 76/114 (66.67%), Postives = 89/114 (78.07%), Query Frame = -3 Query: 133 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 474 K + E+ A AR++ MSA K RRVIDQIRG SYE+TLMILELMPYRACYPIFKL+YSAAAN HN G EA L I+KAEVNE KR +P+A+GR + IKRPTCHIT+VL + Sbjct: 3 KKTQGTEIRALARHIGMSAQKARRVIDQIRGCSYEQTLMILELMPYRACYPIFKLVYSAAANASHNRGLKEADLFISKAEVNEGVIVKRLKPQARGRSYPIKRPTCHITIVLSE 116
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_PIPCE (50S ribosomal protein L22, chloroplastic OS=Piper cenocladum GN=rpl22 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.386e-37 Identity = 76/126 (60.32%), Postives = 96/126 (76.19%), Query Frame = -3 Query: 118 SPPNNRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 495 S +R K + V A AR + +SAHK RRVIDQIRGRSY ETL +LELMPYRA YPIFKL+YSAAA+ HN+GF EA I+KAEVNE KR +P+A+GR ++IK+PTCHIT+VL+D +L++ Sbjct: 10 SEQKHRLKRIARTRVQAFARDVRISAHKARRVIDQIRGRSYVETLTLLELMPYRASYPIFKLLYSAAASASHNLGFKEADSYISKAEVNEGAVLKRLKPRARGRSYLIKKPTCHITIVLKDRTLNE 135
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_CHLSC (50S ribosomal protein L22, chloroplastic OS=Chloranthus spicatus GN=rpl22 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.775e-37 Identity = 76/118 (64.41%), Postives = 93/118 (78.81%), Query Frame = -3 Query: 127 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 480 + + N EV A AR++ MSAHK+RRVIDQIRGRSYE+TLMILELMPYRA YPIF+LIYSAAAN MG EA +I+KAEVNE T K+ +P+A+GR + IK+PTCHI +VL+D S Sbjct: 3 KKRFNSDIEVQAFARHICMSAHKMRRVIDQIRGRSYEQTLMILELMPYRASYPIFRLIYSAAANASKTMGSKEADSLISKAEVNEGTFIKKLKPRARGRSYPIKKPTCHIIIVLKDKS 120
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_ILLOL (50S ribosomal protein L22, chloroplastic OS=Illicium oligandrum GN=rpl22 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.680e-36 Identity = 76/116 (65.52%), Postives = 88/116 (75.86%), Query Frame = -3 Query: 127 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 474 K + EV A A+Y+ MSAHK RRVIDQIRGRSYE+TLMILELMPYRA Y IFKL+YSAAAN HN G NEA I+KAEVN K+ +P+A+GR + IKRPTCHIT+VL S Sbjct: 3 KGKSRTEVKALAQYICMSAHKARRVIDQIRGRSYEQTLMILELMPYRASYHIFKLVYSAAANASHNKGLNEADSFISKAEVNGGVIVKKCKPRARGRSYPIKRPTCHITIVLNKRS 118
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_ACOCL (50S ribosomal protein L22, chloroplastic OS=Acorus calamus GN=rpl22 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.866e-36 Identity = 74/116 (63.79%), Postives = 91/116 (78.45%), Query Frame = -3 Query: 133 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 480 +N E A A+ + MSA+K RRVIDQIRGRSYEET+MILELMPYRA +PI KL+YSAAAN ++NMG +EA L I+KAEVN T K+ RP+A+GR + IKRPTCHIT+VL+D Sbjct: 4 KNWITTGTEARALAQNISMSAYKARRVIDQIRGRSYEETIMILELMPYRASFPILKLVYSAAANAINNMGLSEADLFISKAEVNGGTFVKKLRPRARGRSYAIKRPTCHITIVLKD 119
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_ACOAM (50S ribosomal protein L22, chloroplastic OS=Acorus americanus GN=rpl22 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.866e-36 Identity = 74/116 (63.79%), Postives = 91/116 (78.45%), Query Frame = -3 Query: 133 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 480 +N E A A+ + MSA+K RRVIDQIRGRSYEET+MILELMPYRA +PI KL+YSAAAN ++NMG +EA L I+KAEVN T K+ RP+A+GR + IKRPTCHIT+VL+D Sbjct: 4 KNWITTGTEARALAQNISMSAYKARRVIDQIRGRSYEETIMILELMPYRASFPILKLVYSAAANAINNMGLSEADLFISKAEVNGGTFVKKLRPRARGRSYAIKRPTCHITIVLKD 119
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_CUSEX (50S ribosomal protein L22, plastid OS=Cuscuta exaltata GN=rpl22 PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 3.744e-36 Identity = 72/116 (62.07%), Postives = 93/116 (80.17%), Query Frame = -3 Query: 118 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 465 K E+ A +++ MSA K RR+ID+IRGRSYEETL+ILELMPYRA YPIFKL+YSAA+N + + NEA+LVI KAEVNE + K+ +P+A+GR + IKRPTCHIT+VL+D+S D Sbjct: 5 KPPEIYALGQHISMSADKARRIIDRIRGRSYEETLLILELMPYRAAYPIFKLVYSAASNASYTLASNEANLVIIKAEVNEGPAIKKLKPRARGRCYPIKRPTCHITIVLKDISFYD 120
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_AMBTC (50S ribosomal protein L22, chloroplastic OS=Amborella trichopoda GN=rpl22 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.385e-36 Identity = 71/108 (65.74%), Postives = 87/108 (80.56%), Query Frame = -3 Query: 133 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 456 E+ A A+++ MS HK RRVIDQIRG SYE+TLMILELMPYR CYP+FKL+YSAAAN HNMG NEA I+KAEV+ K+ +PKA+GR + IKRPTCHIT+VL++ Sbjct: 9 EIRALAKHICMSPHKARRVIDQIRGCSYEQTLMILELMPYRVCYPVFKLVYSAAANASHNMGLNEADSFISKAEVHGGAMMKKFKPKARGRSYPIKRPTCHITIVLKE 116 The following BLAST results are available for this feature:
BLAST of CF832667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832667 ID=CF832667; Name=CF832667; organism=Citrus sinensis; type=EST; length=500bpback to top |