CF832667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_SPIMX (50S ribosomal protein L22, chloroplastic OS=Spirogyra maxima GN=rpl22 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.394e-29 Identity = 62/110 (56.36%), Postives = 82/110 (74.55%), Query Frame = -3 Query: 139 NKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 468 + K EV A + + MS HKVR+VIDQIRGRSYEE LM+L MPYRAC PI K++ SAAAN HN GF +++L I++A+V++ KR RP+AQGR I +PTC+IT+V+ Sbjct: 6 DSKLEVLALGKNIRMSPHKVRKVIDQIRGRSYEEALMLLTFMPYRACDPILKVVCSAAANASHNFGFRKSTLYISEAKVDKGPLFKRFRPRAQGRGFPISKPTCYITIVI 115
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_PHATR (50S ribosomal protein L22, chloroplastic OS=Phaeodactylum tricornutum GN=rpl22 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.560e-29 Identity = 60/106 (56.60%), Postives = 80/106 (75.47%), Query Frame = -3 Query: 136 VSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLR 453 V+A A+Y+ MS HK+RRV+DQIRGRSY+E LMILE +PY A PI+++I+SAAAN HN G ++ L+I K +E KR RP+AQGR + I +PTCHITVV++ Sbjct: 7 VTAVAKYIRMSPHKIRRVLDQIRGRSYQEALMILEFLPYDAGGPIWQVIHSAAANAKHNSGLDKKKLIIDKVFADEGPKLKRIRPRAQGRAYKILKPTCHITVVMK 112
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SYNP2 (50S ribosomal protein L22 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplV PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 9.874e-29 Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = -3 Query: 139 KAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 462 + EV A ARY+ MS KVRRV+DQIRGRSY E L+ILE MPYRAC P+ K++ SA AN HN G + A LV++ A + KR RP+AQGR + I++PTCHITV + Sbjct: 6 QTEVKAIARYIRMSPIKVRRVLDQIRGRSYREALIILEFMPYRACEPVLKVLRSAVANAEHNEGLDPADLVVSAAFADAGPVLKRFRPRAQGRAYQIRKPTCHITVAV 113
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_WELMI (50S ribosomal protein L22, chloroplastic OS=Welwitschia mirabilis GN=rpl22 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.290e-28 Identity = 63/118 (53.39%), Postives = 88/118 (74.58%), Query Frame = -3 Query: 130 RNKTNK-KAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDM 480 + TNK EV A A+ + MSAHKVRRV+DQIRGR Y + ++L+ +PY+ACYPIF+L+ SAAAN +NM F + L +++AEVNEATS+KR +A+GR I++ TCHIT+VL+ + Sbjct: 2 KTSTNKPNEEVRAFAKNIRMSAHKVRRVMDQIRGRPYAQAYILLKFLPYKACYPIFQLLNSAAANAKNNMSFKK-ELFVSRAEVNEATSSKRFHFRAKGRSFCIRKQTCHITIVLKQL 118
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_HUPLU (50S ribosomal protein L22, chloroplastic OS=Huperzia lucidula GN=rpl22 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.290e-28 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = -3 Query: 115 NKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDE 477 N +NK EV + +HMSA+K+RRV++QIRG SY E +MILE MPYRACYP+ KL+ +AA N H MG +A L +++ +V+ + AKR R +AQGR + I +PTCHIT++L+ S+ E Sbjct: 5 NDSNK--EVKIFVKNIHMSAYKLRRVVNQIRGHSYGEAVMILEFMPYRACYPVLKLVSNAAENANHKMGLRKADLFVSEVKVDAGSFAKRLRLRAQGRNYPIHKPTCHITIILKKKSVYKE 123
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_NOSP7 (50S ribosomal protein L22 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplV PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.200e-28 Identity = 60/106 (56.60%), Postives = 78/106 (73.58%), Query Frame = -3 Query: 139 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 456 EV A AR++ +SA+KVRRV+DQIRGRSY E L+ILE MPYRA PI K++ SAAAN HN G + LVI +A ++ KR +P+AQGR + I++PTCHITV + Sbjct: 7 EVKAIARFIRISAYKVRRVLDQIRGRSYREALIILEFMPYRATEPILKVLRSAAANAEHNAGLDRTQLVITQAYADQGPPLKRFQPRAQGRAYQIRKPTCHITVAV 112
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_CHAVU (50S ribosomal protein L22, chloroplastic OS=Chara vulgaris GN=rpl22 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.752e-28 Identity = 59/116 (50.86%), Postives = 86/116 (74.14%), Query Frame = -3 Query: 136 NRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLR 483 N+ + + V AS + L++S HK R+V++QIRG SYE+ LMILE MPYRAC PI +LI SAA+N HN+G + +L I++A+V+E T+ KR +P+AQGR + I +PTCHIT+ ++ Sbjct: 2 NQKQEDFSPSVKASLKSLNISFHKTRKVVNQIRGCSYEKALMILEFMPYRACKPITQLISSAASNANHNLGLKKKNLFISEAKVDEGTTIKRFQPRAQGRAYSIHKPTCHITIGMK 117
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RK22_MESVI (50S ribosomal protein L22, chloroplastic OS=Mesostigma viride GN=rpl22 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 4.901e-28 Identity = 61/109 (55.96%), Postives = 83/109 (76.15%), Query Frame = -3 Query: 130 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDM 456 +V A AR + MS KVRRV+DQIRGRSYEE LMIL+ MPYRAC PI K++YSAAAN +N+G +ASL I++A+V++ KR RP+AQGR I++PTC I++ ++ + Sbjct: 10 KVKAVARGVFMSPQKVRRVLDQIRGRSYEEALMILQFMPYRACEPISKVLYSAAANAKNNLGLTKASLSISEAKVDKGPILKRFRPRAQGRGFPIRKPTCQISITVQSI 118
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SYNP6 (50S ribosomal protein L22 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplV PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.426e-27 Identity = 57/106 (53.77%), Postives = 76/106 (71.70%), Query Frame = -3 Query: 139 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 456 EV A ARY+ MS KVRRV+DQ+RGRSY E L++LE MPY++C PI K++ SA AN HN G + LVI++A + S KR RP+AQGR + I++ TCHIT+ + Sbjct: 8 EVKAIARYIRMSPSKVRRVLDQLRGRSYREALILLEFMPYKSCEPILKVLRSAVANAEHNQGLDPTQLVISQAYADMGPSLKRFRPRAQGRAYQIRKQTCHITIAV 113
BLAST of CF832667 vs. ExPASy Swiss-Prot
Match: RL22_SYNE7 (50S ribosomal protein L22 OS=Synechococcus elongatus (strain PCC 7942) GN=rplV PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.426e-27 Identity = 57/106 (53.77%), Postives = 76/106 (71.70%), Query Frame = -3 Query: 139 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 456 EV A ARY+ MS KVRRV+DQ+RGRSY E L++LE MPY++C PI K++ SA AN HN G + LVI++A + S KR RP+AQGR + I++ TCHIT+ + Sbjct: 8 EVKAIARYIRMSPSKVRRVLDQLRGRSYREALILLEFMPYKSCEPILKVLRSAVANAEHNQGLDPTQLVISQAYADMGPSLKRFRPRAQGRAYQIRKQTCHITIAV 113 The following BLAST results are available for this feature:
BLAST of CF832667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832667 ID=CF832667; Name=CF832667; organism=Citrus sinensis; type=EST; length=500bpback to top |