CF832668
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_POPTR (50S ribosomal protein L22, chloroplastic OS=Populus trichocarpa GN=rpl22 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 3.556e-42 Identity = 81/113 (71.68%), Postives = 97/113 (85.84%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 384 E SAS Y+ MSAHK RR+IDQIRGRSYEETLMILELMPYRACYPIFKL+YSAAAN HNMG NEASLVI+KAEVNE + K+ +P+A+GR ++IKR TCHI++VL D+S ++ Sbjct: 11 EASASGFYISMSAHKARRIIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANASHNMGLNEASLVISKAEVNEGATMKKFKPRARGRSYLIKRQTCHISIVLEDISYEE 123
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_MANES (50S ribosomal protein L22, chloroplastic OS=Manihot esculenta GN=rpl22 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 7.922e-42 Identity = 81/115 (70.43%), Postives = 100/115 (86.96%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 EV A +++ MS HK RR+IDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAAN HNMGFNEA+L+I+KAEVNE T+ K+ +P+A+GR + IKR TCHI++VL+++SL +EY Sbjct: 13 EVYALGQHICMSPHKARRIIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANASHNMGFNEANLIISKAEVNEGTTVKKLKPQARGRGYPIKRSTCHISIVLKNISLYEEY 127
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_SOLLC (50S ribosomal protein L22, chloroplastic OS=Solanum lycopersicum GN=rpl22 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.351e-41 Identity = 82/118 (69.49%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 KK EV A ++ MSA K RRVIDQIRGRSYEETLMILELMPYRACYPI KL+YSAAAN +NMG +E +LVI+KAEVNE T+ K+ +P+A+GR IKR TCHIT+V++D+SLDDEY Sbjct: 5 KKTEVYALGEHISMSADKARRVIDQIRGRSYEETLMILELMPYRACYPILKLVYSAAANASYNMGSSETNLVISKAEVNEGTTVKKLKPRARGRSFPIKRSTCHITIVMKDISLDDEY 122
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_SOLBU (50S ribosomal protein L22, chloroplastic OS=Solanum bulbocastanum GN=rpl22 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.351e-41 Identity = 82/118 (69.49%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 KK EV A ++ MSA K RRVIDQIRGRSYEETLMILELMPYRACYPI KL+YSAAAN +NMG +E +LVI+KAEVNE T+ K+ +P+A+GR IKR TCHIT+V++D+SLDDEY Sbjct: 5 KKTEVYALGEHISMSADKARRVIDQIRGRSYEETLMILELMPYRACYPILKLVYSAAANASYNMGSSETNLVISKAEVNEGTTVKKLKPRARGRSFPIKRSTCHITIVMKDISLDDEY 122
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_NICTO (50S ribosomal protein L22, chloroplastic OS=Nicotiana tomentosiformis GN=rpl22 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.010e-41 Identity = 82/118 (69.49%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 KK EV A ++ MSA K RRVIDQIRGRSYEETLMILELMPYRACYPI KL+YSAAAN +NMG +EA+LVI+KAEVN T+ K+ +P+A+GR IKR TCHIT+V++D+SLDDEY Sbjct: 5 KKTEVYALGEHISMSADKARRVIDQIRGRSYEETLMILELMPYRACYPILKLVYSAAANASYNMGSSEANLVISKAEVNGGTTVKKLKPRARGRSFPIKRSTCHITIVMKDISLDDEY 122
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_LACSA (50S ribosomal protein L22, chloroplastic OS=Lactuca sativa GN=rpl22 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 5.135e-41 Identity = 80/116 (68.97%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 384 + EV A +++ MSAHK RRVIDQIRGRSYEETLMILELMPYRACYPIFKL+YSAAAN NMG NE +LVI+KAEVNE T KR +P+A+GR I++PTCHIT+V++D+SLD+ Sbjct: 5 RTTEVYALGQHISMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANASFNMGSNEVNLVISKAEVNEGTIVKRLKPRARGRSFAIQKPTCHITIVMKDISLDE 120
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_HELAN (50S ribosomal protein L22, chloroplastic OS=Helianthus annuus GN=rpl22 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 6.706e-41 Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 384 + EV A +++ MSAHK RRVIDQIRGRSYEETLMILELMPYRACYPIFKL+YSAAAN NMG NEA+LVI+KAEVN+ T KR +P+A+GR I++PTCHIT+V++D+SLD+ Sbjct: 5 RTTEVYALGQHISMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANASSNMGSNEANLVISKAEVNKGTIMKRLKPRARGRSFAIQKPTCHITIVMKDISLDE 120
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_TOBAC (50S ribosomal protein L22, chloroplastic OS=Nicotiana tabacum GN=rpl22 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 8.759e-41 Identity = 82/118 (69.49%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 KK EV A ++ MSA K RRVI+QIRGRSYEETLMILELMPYRACYPI KLIYSAAAN +NMG +EA+LVI+KAEVN T+ K+ +P+A+GR IKR TCHIT+V++D+SLDDEY Sbjct: 5 KKTEVYALGEHISMSADKARRVINQIRGRSYEETLMILELMPYRACYPILKLIYSAAANASYNMGSSEANLVISKAEVNGGTTVKKLKPRARGRSFPIKRSTCHITIVMKDISLDDEY 122
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_NICSY (50S ribosomal protein L22, chloroplastic OS=Nicotiana sylvestris GN=rpl22 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 8.759e-41 Identity = 82/118 (69.49%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 KK EV A ++ MSA K RRVI+QIRGRSYEETLMILELMPYRACYPI KLIYSAAAN +NMG +EA+LVI+KAEVN T+ K+ +P+A+GR IKR TCHIT+V++D+SLDDEY Sbjct: 5 KKTEVYALGEHISMSADKARRVINQIRGRSYEETLMILELMPYRACYPILKLIYSAAANASYNMGSSEANLVISKAEVNGGTTVKKLKPRARGRSFPIKRSTCHITIVMKDISLDDEY 122
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_CERDE (50S ribosomal protein L22, chloroplastic OS=Ceratophyllum demersum GN=rpl22 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 8.759e-41 Identity = 80/114 (70.18%), Postives = 92/114 (80.70%), Query Frame = 1 Query: 28 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 K + EV A A+Y+HMSAHK RRV+DQIRGRSYEETLMILELMPYRA YPIFKL+YSAAAN HNMGFNEA I+KAEVNE K+ P+A+GR + IKR TCHIT+VL+D Sbjct: 3 KRKSRTEVKAVAQYIHMSAHKARRVVDQIRGRSYEETLMILELMPYRASYPIFKLVYSAAANANHNMGFNEADSFISKAEVNEGVIVKKLNPQARGRSYTIKRSTCHITIVLKD 116 The following BLAST results are available for this feature:
BLAST of CF832668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832668 ID=CF832668; Name=CF832668; organism=Citrus sinensis; type=EST; length=503bpback to top |