CF832668
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PROM1 (50S ribosomal protein L22 OS=Prochlorococcus marinus (strain NATL1A) GN=rplV PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.697e-23 Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 31 TNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 357 ++ K A RY+ SA KVRRV+DQIRGR+Y + L++LE MPYR+ PI K++ SA AN +N+G + +SL+I+ A + KR RP+AQGR IK+ TCHI++ Sbjct: 4 SSTKTTAQAHGRYIRGSASKVRRVLDQIRGRTYRDALIMLEFMPYRSTEPITKVLRSAVANAENNLGLDPSSLMISTATADMGPPMKRYRPRAQGRAFAIKKQTCHISI 112
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PROMA (50S ribosomal protein L22 OS=Prochlorococcus marinus GN=rplV PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 51/103 (49.51%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 55 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 A R++ SA KVRRV+DQIRGR+Y + L++LE MPYR+ PI K++ SA AN +N+G + +SL+I A + S KR RP+AQGR IK+ TCHI++ + Sbjct: 9 AHGRFIRGSASKVRRVLDQIRGRTYRDALIMLEFMPYRSTGPITKVLRSAVANAENNLGMDPSSLIIKTASADMGPSMKRYRPRAQGRAFAIKKQTCHISIAV 111
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_CHLRE (50S ribosomal protein L22, chloroplastic OS=Chlamydomonas reinhardtii GN=ERY2 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.972e-22 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 55 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 357 A ++ SA K+RRV+D IRGRSYEE L++ E MPYRAC I K + SAAAN HN G + LV+++ +E KR RP+AQGR ++I +PT H+T+ Sbjct: 68 AHLKFQRGSADKIRRVLDVIRGRSYEEALVLCEYMPYRACEKIIKCLMSAAANAKHNKGALKTKLVVSECFADEGPVLKRARPRAQGRANLIMKPTFHMTI 168
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_GUITH (50S ribosomal protein L22, chloroplastic OS=Guillardia theta GN=rpl22 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 9.106e-22 Identity = 48/100 (48.00%), Postives = 70/100 (70.00%), Query Frame = 1 Query: 58 SARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 357 +A+Y+ MS K++RV++QIRG+SY+E+LMILE MPY AC P+ + + SA AN HN G N+ LV++ A V+ +R RP+AQGR I++ T HI + Sbjct: 14 TAKYIRMSPSKIQRVLNQIRGKSYKESLMILEFMPYAACKPVLQAVQSAGANAQHNKGINKNDLVVSLASVDNGPVLRRFRPRAQGRGFKIQKFTSHIRI 113
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_GRATE (50S ribosomal protein L22, chloroplastic OS=Gracilaria tenuistipitata GN=rpl22 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21 Identity = 46/111 (41.44%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 31 TNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 TNK ++ A+ +Y+ +S K RRV++QI+G+ Y+E ++ILE M Y+ C I K I +A N N+ + + +L+I +A N+ KR +P+AQGR I++PTCHIT+ L Sbjct: 2 TNKTTKIQATGKYVRLSTAKTRRVLNQIKGKKYQEAILILEFMTYKPC-KIIKKILESAGNNALNLKYEKQNLIIKQAFANDGPKLKRFQPRAQGRAFRIQKPTCHITINL 111
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RK22_GRATL (50S ribosomal protein L22, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl22 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20 Identity = 46/111 (41.44%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 31 TNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 TNK + A+ +Y+ +S K RRV++QI+G+ Y+E ++ILE M Y+ C I K I +A N N+ + + +L+I +A N+ KR +P+AQGR I++PTCHIT+ L Sbjct: 2 TNKTTNIQATGKYVRLSTAKTRRVLNQIKGKKYQEAILILEFMTYKPC-KIIKKILESAGNNALNLKYEKQNLIIKQAFANDGPKLKRFQPRAQGRAFRIQKPTCHITINL 111
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_MYCVP (50S ribosomal protein L22 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=rplV PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.243e-20 Identity = 51/103 (49.51%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 55 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 A AR++ +SA K RRVID +RG+S EE L IL P A P+ K+I SAAAN +N G + SLV+A +E +AKR RP+AQGR + I++ T HITV++ Sbjct: 12 AKARFVRISATKARRVIDLVRGKSVEEALDILRWAPQSASEPVAKVIASAAANAQNNEGLDPTSLVVATIHADEGPTAKRIRPRAQGRAYRIRKRTSHITVIV 114
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_MYCSM (50S ribosomal protein L22 OS=Mycobacterium smegmatis GN=rplV PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.929e-20 Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 52 SASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 +A ARY+ +SA K RRVID +RG+S EE L IL P A P+ K+I SAAAN +N G + ++LV+A +E +AKR RP+AQGR I++ T HITV++ Sbjct: 11 TAKARYVRVSATKARRVIDLVRGKSVEEALDILRWAPQAASEPVAKVIASAAANAQNNEGLDPSTLVVATVYADEGPTAKRIRPRAQGRAFRIRKRTSHITVIV 114
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_MYCS2 (50S ribosomal protein L22 OS=Mycobacterium smegmatis GN=rplV PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.929e-20 Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 52 SASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 +A ARY+ +SA K RRVID +RG+S EE L IL P A P+ K+I SAAAN +N G + ++LV+A +E +AKR RP+AQGR I++ T HITV++ Sbjct: 11 TAKARYVRVSATKARRVIDLVRGKSVEEALDILRWAPQAASEPVAKVIASAAANAQNNEGLDPSTLVVATVYADEGPTAKRIRPRAQGRAFRIRKRTSHITVIV 114
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_GLOVI (50S ribosomal protein L22 OS=Gloeobacter violaceus GN=rplV PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.929e-20 Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 375 EV A AR++ MS KVRR++DQIRGRSY++ L+IL+ MP+ A PI K++ SAAAN HN + +LV++ A + KR R +GR +++ T HITV +R S Sbjct: 4 EVKAVARFIRMSPFKVRRILDQIRGRSYQDALIILQFMPHAATEPIKKVLESAAANAEHNFSLDRRALVVSTAFADGGPVLKRFRAGDRGRARPVRKRTSHITVAVRSTS 113 The following BLAST results are available for this feature:
BLAST of CF832668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832668 ID=CF832668; Name=CF832668; organism=Citrus sinensis; type=EST; length=503bpback to top |