CF832668
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_SHEB2 (50S ribosomal protein L22 OS=Shewanella baltica (strain OS223) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV A R+ SA K R V DQIRG + L IL P +A + K++ SA AN HN G + L + V+E + KR P+A+GR I + T HITVV+ D Sbjct: 2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSYWF (50S ribosomal protein L22 OS=Psychrobacter sp. (strain PRwf-1) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 357 EV+A R +SA KVR V D++RG+S E L IL + + K + SA AN HN G + +L ++ V+E + KR P+A+GR I + TCHITV Sbjct: 2 EVTAKLRGAAISAQKVRLVADEVRGKSIERALDILAFSNKKGAVFVKKCLESAIANAEHNHGLDIDTLKVSTIYVDEGITLKRILPRAKGRADRISKRTCHITV 105
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEPW (50S ribosomal protein L22 OS=Pseudomonas putida (strain W619) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEPK (50S ribosomal protein L22 OS=Pseudomonas putida (strain KT2440) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEPG (50S ribosomal protein L22 OS=Pseudomonas putida (strain GB-1) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEPF (50S ribosomal protein L22 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEP1 (50S ribosomal protein L22 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEMY (50S ribosomal protein L22 OS=Pseudomonas mendocina (strain ymp) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEFS (50S ribosomal protein L22 OS=Pseudomonas fluorescens (strain SBW25) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEF5 (50S ribosomal protein L22 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 3 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 110 The following BLAST results are available for this feature:
BLAST of CF832668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832668 ID=CF832668; Name=CF832668; organism=Citrus sinensis; type=EST; length=503bpback to top |