CF832668
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEE4 (50S ribosomal protein L22 OS=Pseudomonas entomophila (strain L48) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEAE (50S ribosomal protein L22 OS=Pseudomonas aeruginosa GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEAB (50S ribosomal protein L22 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEA8 (50S ribosomal protein L22 OS=Pseudomonas aeruginosa (strain LESB58) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_PSEA7 (50S ribosomal protein L22 OS=Pseudomonas aeruginosa (strain PA7) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV+A +SA K R V DQIRG+ E L +L +A + K++ SA AN HN G + L ++ VNE S KR P+A+GR I + +CHITV + D Sbjct: 2 EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_POLNS (50S ribosomal protein L22 OS=Polynucleobacter necessarius (strain STIR1) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 EV A + +SA K R V DQIRG L IL P +A + + K++ SA AN HN G + L ++ V++ TS KR +A+GR + I++ TCHI+V L Sbjct: 4 EVKAIHKGARISAQKTRLVADQIRGLPIARALNILNFSPKKAAFIVKKVVESAVANAEHNKGADIDELKVSAIIVDKGTSLKRFTARAKGRGNQIEKQTCHISVTL 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_HAES1 (50S ribosomal protein L22 OS=Haemophilus somnus (strain 129Pt) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 E A RY SA K R V D +RG+ + L IL +A + K++ SA AN HN G + L +AK V+E S KR P+A+GR I + T HITVV+ D Sbjct: 2 ETIAKHRYARTSAQKARLVADLVRGKKVAQALEILTFTNKKAAALVKKVLESAIANAEHNDGADIDDLKVAKIFVDEGPSMKRVMPRAKGRADRILKRTSHITVVVSD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_HAEPS (50S ribosomal protein L22 OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 45/108 (41.67%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 E A RY SA K R V D IRG+ L IL +A + K++ SA AN HN G + L +AK V+E S KR P+A+GR I + T HITVV+ D Sbjct: 2 ETIAKHRYARTSAQKARLVADLIRGKKVSAALEILTFTNKKAAALVKKVLESAIANAEHNDGADVDDLKVAKIFVDEGPSMKRVMPRAKGRADRILKRTSHITVVVSD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_GEOSW (50S ribosomal protein L22 OS=Geobacillus sp. (strain WCH70) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 + A AR + ++ K R VID IRG+ E + IL P A I K++ SA AN HN + LVI +A V+E + KR RP+A GR I + T HIT+V+ + Sbjct: 2 QAKAVARTVRIAPRKARLVIDLIRGKEVGEAVAILRHTPKAASPIIEKVLKSAVANAEHNYDMDVNKLVITEAYVDEGPTLKRFRPRAMGRASAINKRTSHITIVVSE 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_GEOKA (50S ribosomal protein L22 OS=Geobacillus kaustophilus GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 + A AR + ++ K R VID IRG+ E IL P A I K++ SA AN HN + +LVI +A V+E + KR RP+A GR I + T HIT+V+ + Sbjct: 2 QAKAVARTVRIAPRKARLVIDLIRGKEVGEAFAILRHTPKAASPIIEKVLKSAVANAEHNYDMDVNNLVITQAYVDEGPTLKRFRPRAMGRASAINKRTSHITIVVSE 109 The following BLAST results are available for this feature:
BLAST of CF832668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832668 ID=CF832668; Name=CF832668; organism=Citrus sinensis; type=EST; length=503bpback to top |