CF832668
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_BORPE (50S ribosomal protein L22 OS=Bordetella pertussis GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 357 E +A R +H+SA K R V D IRG+S + L IL P +A + K + SA AN HN G + L + V++A S KR +A+GR + I++ TCHITV Sbjct: 2 ETTAIIRGVHISAQKTRLVADLIRGKSVAQALNILTFSPKKAAVILKKAVESAIANAEHNDGADIDELKVTTIFVDKAQSMKRFSARAKGRGNRIEKQTCHITV 105
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_BORPA (50S ribosomal protein L22 OS=Bordetella parapertussis GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 357 E +A R +H+SA K R V D IRG+S + L IL P +A + K + SA AN HN G + L + V++A S KR +A+GR + I++ TCHITV Sbjct: 2 ETTAIIRGVHISAQKTRLVADLIRGKSVAQALNILTFSPKKAAVILKKAVESAIANAEHNDGADIDELKVTTIFVDKAQSMKRFSARAKGRGNRIEKQTCHITV 105
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_BORBR (50S ribosomal protein L22 OS=Bordetella bronchiseptica GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 357 E +A R +H+SA K R V D IRG+S + L IL P +A + K + SA AN HN G + L + V++A S KR +A+GR + I++ TCHITV Sbjct: 2 ETTAIIRGVHISAQKTRLVADLIRGKSVAQALNILTFSPKKAAVILKKAVESAIANAEHNDGADIDELKVTTIFVDKAQSMKRFSARAKGRGNRIEKQTCHITV 105
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_BORA1 (50S ribosomal protein L22 OS=Bordetella avium (strain 197N) GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 357 E +A R +H+SA K R V D IRG+S + L IL P +A + K + SA AN HN G + L + V++A S KR +A+GR + I++ TCHITV Sbjct: 2 ETTAIIRGVHISAQKTRLVADLIRGKSVAQALNILTFSPKKAAVILKKAVESAIANAEHNDGADIDELKVTTIFVDKAQSMKRFSARAKGRGNRIEKQTCHITV 105
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_BACST (50S ribosomal protein L22 OS=Bacillus stearothermophilus GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 + A AR + ++ K R VID IRG+ E IL P A I K++ SA AN HN + +LVI++A V+E + KR RP+A GR I + T HIT+V+ + Sbjct: 2 QAKAVARTVRIAPRKARLVIDLIRGKEVGERFAILRHTPKAASPIIEKVLKSAVANAEHNYDMDVNNLVISQAYVDEGPTLKRFRPRAMGRASAINKRTSHITIVVSE 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_BACHD (50S ribosomal protein L22 OS=Bacillus halodurans GN=rplV PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 + A A+ + ++ K R VID IRG+ E + IL+ P A I K++ SA AN HN +LVI++A V+E + KR RP+A GR I + T HIT+V+ + Sbjct: 2 QAKAVAKQVRIAPRKARLVIDLIRGKQVGEAIAILKHTPKAASPIIEKVLNSAIANAEHNYEMEPNNLVISEAFVDEGVTLKRFRPRAMGRASRINKRTSHITIVVTE 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_KLEP7 (50S ribosomal protein L22 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rplV PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 45/108 (41.67%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 E A R+ SA KVR V D IRG+ + L IL +A + K++ SA AN HN G + L +AK V+E S KR P+A+GR I + T HITVV+ D Sbjct: 2 ETLAQHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVAKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_KLEP3 (50S ribosomal protein L22 OS=Klebsiella pneumoniae (strain 342) GN=rplV PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 45/108 (41.67%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 E A R+ SA KVR V D IRG+ + L IL +A + K++ SA AN HN G + L +AK V+E S KR P+A+GR I + T HITVV+ D Sbjct: 2 ETLAQHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVAKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_DEHE1 (50S ribosomal protein L22 OS=Dehalococcoides ethenogenes (strain 195) GN=rplV PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV A + SA KVR +D +RG+ E + +L M + K+I SAAAN +N N A L I++ +EA KR RP+A+GRV I + + HITVV+ D Sbjct: 2 EVKAIVKDTGYSALKVRLCVDMVRGKKVSEAITMLRFMTSPTAKVVSKVIKSAAANAENNFQMNPADLKISQIYADEARMLKRMRPQARGRVSPILKRSSHITVVVAD 109
BLAST of CF832668 vs. ExPASy Swiss-Prot
Match: RL22_BORPD (50S ribosomal protein L22 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=rplV PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 357 E +A R +H+SA K R V D IRG+S + L IL P +A + K + SA AN HN G + L I V++A S KR +A+GR + I++ TCHITV Sbjct: 2 ETTAIIRGVHISAQKTRLVADLIRGKSVAQALNILTFSPKKAAGILKKAVESAIANAEHNDGADIDELKITTIFVDKAQSMKRFSARAKGRGNRIEKQTCHITV 105 The following BLAST results are available for this feature:
BLAST of CF832668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832668 ID=CF832668; Name=CF832668; organism=Citrus sinensis; type=EST; length=503bpback to top |