CF832669
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_OROMI (50S ribosomal protein L22, plastid OS=Orobanche minor GN=rpl22 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.053e-38 Identity = 79/120 (65.83%), Postives = 99/120 (82.50%), Query Frame = -3 Query: 122 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLD 481 +NKT KK EV A R++ +SA K RRVIDQIRGRSYEETLMILELMPYRACYPI KL+YSAA+N ++M E +LVI+KAEVNE T K+ +P+A+GR ++IKR TCHIT+V++D+SLD Sbjct: 3 KNKT-KKTEVYALCRHISLSADKARRVIDQIRGRSYEETLMILELMPYRACYPILKLVYSAASNAAYSMDSAEVNLVISKAEVNEGTITKKFKPRARGRSYVIKRTTCHITIVVKDISLD 121
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_JASNU (50S ribosomal protein L22, chloroplastic OS=Jasminum nudiflorum GN=rpl22 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.375e-38 Identity = 79/118 (66.95%), Postives = 96/118 (81.36%), Query Frame = -3 Query: 113 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 466 KK EV A R++ +SA K RRVIDQIRGRSYEETLMILELMPYRAC PI KL+YSAAAN NMG N+A+LVI+ AEVNE T+ K+ +P+A+G + IKR TCHIT+ ++D+SLDDEY Sbjct: 4 KKTEVYALRRHISLSADKARRVIDQIRGRSYEETLMILELMPYRACSPISKLVYSAAANANSNMGSNKANLVISNAEVNEGTTRKKFKPRARGHCYPIKRRTCHITIGVKDISLDDEY 121
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_SPIOL (50S ribosomal protein L22, chloroplastic OS=Spinacia oleracea GN=rpl22 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.795e-38 Identity = 76/115 (66.09%), Postives = 93/115 (80.87%), Query Frame = -3 Query: 113 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 457 E++ + MS K RRVIDQIRGRSY ETLMILELMPYRACYPIFKLIYSAAAN HN FN+A+L+I+KAEVN+ + K+ +P+A+GR +MIKRPTCHIT+VLRD++ D Y Sbjct: 31 EITTRGYSISMSVDKARRVIDQIRGRSYAETLMILELMPYRACYPIFKLIYSAAANASHNKQFNKANLIISKAEVNKGITLKKVKPRARGRSYMIKRPTCHITIVLRDITHFDSY 145
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_LEPVR (50S ribosomal protein L22, chloroplastic OS=Lepidium virginicum GN=rpl22 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.795e-38 Identity = 76/121 (62.81%), Postives = 91/121 (75.21%), Query Frame = -3 Query: 113 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 475 K V A +Y+ MSAHK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR IKR TCHIT+V+ D+S +Y Sbjct: 6 KKKSYTSVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSFPIKRSTCHITIVVEDISFYQQY 126
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_CALFG (50S ribosomal protein L22, chloroplastic OS=Calycanthus floridus var. glaucus GN=rpl22 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 6.822e-38 Identity = 76/123 (61.79%), Postives = 93/123 (75.61%), Query Frame = -3 Query: 128 SPPNNRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 496 S + K + +V A A+++ MSAHK RRV+DQIRGRSY ETLM+LELMPYRA YPIFKL+YSAAAN HN FNEA I+KAEVN T K+ +P+A+GR + IKRPTCHIT+VL+D S Sbjct: 3 SKKKQKMKRSSSTQVQALAQHISMSAHKARRVVDQIRGRSYAETLMLLELMPYRASYPIFKLVYSAAANASHNKSFNEADSFISKAEVNGGTIVKKFKPRAKGRSYPIKRPTCHITIVLKDRS 125
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_DRIGR (50S ribosomal protein L22, chloroplastic OS=Drimys granadensis GN=rpl22 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 8.910e-38 Identity = 75/119 (63.03%), Postives = 94/119 (78.99%), Query Frame = -3 Query: 128 NRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 484 +R K + +V A A+++ MSAHK RRVIDQIRGRSYE+TLM+LELMPYRA YPI KL+YSAAAN HN GFN+A LVI++AEVN T K+ +P+A+G + IKRPTCHI +VL+D S Sbjct: 4 HRKKRSSSTQVQALAQHICMSAHKARRVIDQIRGRSYEKTLMLLELMPYRASYPILKLVYSAAANASHNKGFNKADLVISQAEVNGGTIIKKLKPRARGHSYPIKRPTCHINIVLKDQS 122
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_OENPA (50S ribosomal protein L22, chloroplastic OS=Oenothera parviflora GN=rpl22 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.164e-37 Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = -3 Query: 119 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 475 K EV A +Y+ MSA K RRVIDQIRGRSYEETLM+L LMPYRAC PI KL+ SAAAN HNM FNEA+LVI+KAEVNE T+ K+ +P+A+GR + I+RPTCHI +VL+D S D+ Sbjct: 3 KKKTYGEVYALGQYISMSAPKARRVIDQIRGRSYEETLMLLALMPYRACDPILKLVNSAAANARHNMSFNEATLVISKAEVNEGTTVKKLKPRARGRSYPIRRPTCHIRIVLQDTSFDE 121
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_OENGL (50S ribosomal protein L22, chloroplastic OS=Oenothera glazioviana GN=rpl22 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.164e-37 Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = -3 Query: 119 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 475 K EV A +Y+ MSA K RRVIDQIRGRSYEETLM+L LMPYRAC PI KL+ SAAAN HNM FNEA+LVI+KAEVNE T+ K+ +P+A+GR + I+RPTCHI +VL+D S D+ Sbjct: 3 KKKTYGEVYALGQYISMSAPKARRVIDQIRGRSYEETLMLLALMPYRACDPILKLVNSAAANARHNMSFNEATLVISKAEVNEGTTVKKLKPRARGRSYPIRRPTCHIRIVLQDTSFDE 121
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_OENEH (50S ribosomal protein L22, chloroplastic OS=Oenothera elata subsp. hookeri GN=rpl22 PE=3 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 1.164e-37 Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = -3 Query: 119 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 475 K EV A +Y+ MSA K RRVIDQIRGRSYEETLM+L LMPYRAC PI KL+ SAAAN HNM FNEA+LVI+KAEVNE T+ K+ +P+A+GR + I+RPTCHI +VL+D S D+ Sbjct: 3 KKKTYGEVYALGQYISMSAPKARRVIDQIRGRSYEETLMLLALMPYRACDPILKLVNSAAANARHNMSFNEATLVISKAEVNEGTTVKKLKPRARGRSYPIRRPTCHIRIVLQDTSFDE 121
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_OENBI (50S ribosomal protein L22, chloroplastic OS=Oenothera biennis GN=rpl22 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.164e-37 Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = -3 Query: 119 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 475 K EV A +Y+ MSA K RRVIDQIRGRSYEETLM+L LMPYRAC PI KL+ SAAAN HNM FNEA+LVI+KAEVNE T+ K+ +P+A+GR + I+RPTCHI +VL+D S D+ Sbjct: 3 KKKTYGEVYALGQYISMSAPKARRVIDQIRGRSYEETLMLLALMPYRACDPILKLVNSAAANARHNMSFNEATLVISKAEVNEGTTVKKLKPRARGRSYPIRRPTCHIRIVLQDTSFDE 121 The following BLAST results are available for this feature:
BLAST of CF832669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832669 ID=CF832669; Name=CF832669; organism=Citrus sinensis; type=EST; length=501bpback to top |