CF832669
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_MEDSA (50S ribosomal protein L22, chloroplastic OS=Medicago sativa GN=rpl22 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.542e-32 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = -3 Query: 131 ISPPNNRN---------------KTNKK-AEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDM 499 ++P NN N +TNK AE A +++ MSA K RRVID IRGR YEETLMILELMPYRAC I K+++SA AN +N+G +++SLVI+KAEVNE + KR RP+AQGR + I + TCHIT+ ++ + Sbjct: 51 VTPNNNNNNPFACHVSTSQFGVQETNKSYAEAVAVGKHIRMSADKARRVIDTIRGRPYEETLMILELMPYRACETILKIVFSAGANASNNLGLSKSSLVISKAEVNEGRTMKRTRPRAQGRANRILKRTCHITITVKGL 189
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_MARPO (50S ribosomal protein L22, chloroplastic OS=Marchantia polymorpha GN=rpl22 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.246e-31 Identity = 66/113 (58.41%), Postives = 87/113 (76.99%), Query Frame = -3 Query: 140 NKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 478 N +NKK + A A+++HMS HKVRRV+ QIRGRSYE+ LMILE MPYRAC PI +L+ SAAAN HN G ++ +L I++ +VN+ T KR +P+AQGR + I +PTCHIT+VL Sbjct: 4 NTSNKK--IRAVAKHIHMSPHKVRRVVSQIRGRSYEQALMILEFMPYRACNPILQLLSSAAANANHNFGLSKTNLFISEIQVNKGTFFKRFQPRAQGRGYPIHKPTCHITIVL 114
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_CHLAT (50S ribosomal protein L22, chloroplastic OS=Chlorokybus atmophyticus GN=rpl22 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.378e-30 Identity = 59/109 (54.13%), Postives = 85/109 (77.98%), Query Frame = -3 Query: 131 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDM 457 E A ARY+ MS +KVRR++DQIRGRSYEE LMIL+ MPYRAC P+ K++YSAAAN HN+G N++ L I++ +V++ KR +P+AQGR + I++PTCHI++ ++ + Sbjct: 10 EAKAFARYITMSPYKVRRIVDQIRGRSYEEALMILQFMPYRACNPVLKVLYSAAANAKHNLGLNKSELSISEVKVDQGPVMKRFQPRAQGRGYPIRKPTCHISLTVKGL 118
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_ANGEV (50S ribosomal protein L22, chloroplastic OS=Angiopteris evecta GN=rpl22 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.800e-30 Identity = 64/108 (59.26%), Postives = 84/108 (77.78%), Query Frame = -3 Query: 140 KAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 463 K E ASARY MSA+K RRVI+QIRGRSYE+ L++LE MPYRACY I +LI SAAAN HN+G + A+ I++A+V+E+T KR +P+AQGR + I +PTCHIT+ + Sbjct: 8 KVEARASARYFKMSANKARRVINQIRGRSYEQALILLEFMPYRACYAILQLISSAAANANHNLGLSRANPFISEAKVDESTLFKRFQPRAQGRGYPIHKPTCHITITM 115
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_PEA (50S ribosomal protein L22, chloroplastic OS=Pisum sativum GN=rpl22 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.350e-30 Identity = 62/110 (56.36%), Postives = 82/110 (74.55%), Query Frame = -3 Query: 131 AEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDM 460 AE A R++ MSA K RRV+DQIRGR YE +LM+LELMPYRAC I K+++SA AN HN+G +++SL I+KAEVNE + KR R +AQGR + I + TCHIT+ +R + Sbjct: 84 AETYAVGRHIRMSADKARRVVDQIRGRPYEASLMVLELMPYRACEAIIKIVFSAGANASHNLGLSKSSLFISKAEVNEGKTLKRVRARAQGRANQILKRTCHITITVRGL 193
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RK22_STAPU (50S ribosomal protein L22, chloroplastic OS=Staurastrum punctulatum GN=rpl22 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.009e-30 Identity = 66/128 (51.56%), Postives = 91/128 (71.09%), Query Frame = -3 Query: 116 ISPPNNRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDE 499 +SPP + EV A A+ + MS HKVR+VIDQIRGRSYEE LM+LE MPYRACYPI + + SAAAN HN+G ++A+L+I+K V++ KR RP+AQGR + I++P+C ITV +++ +E Sbjct: 9 VSPPRRDLQ-----EVRAIAKRVRMSPHKVRKVIDQIRGRSYEEALMLLEFMPYRACYPILQTVCSAAANANHNLGLSKANLIISKVMVDQGPVLKRFRPRAQGRGYPIRKPSCTITVFVKNHPSQNE 131
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RL22_THEEB (50S ribosomal protein L22 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplV PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.990e-29 Identity = 58/111 (52.25%), Postives = 82/111 (73.87%), Query Frame = -3 Query: 116 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDE 448 A A+Y+ MS HKVRRV+DQ+RGR+Y + L++L MPYRAC PI K++ SAAAN HN+G + A+LVI++A ++ KR RP+AQGR + I++PTCHIT+ + + DE Sbjct: 11 ACAKYVRMSPHKVRRVLDQLRGRTYRDALIMLRFMPYRACEPITKVLRSAAANATHNLGLDPATLVISQAYADQGPCLKRFRPRAQGRAYQIRKPTCHITIAVAPQNTADE 121
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RL22_SYNY3 (50S ribosomal protein L22 OS=Synechocystis sp. (strain PCC 6803) GN=rplV PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.990e-29 Identity = 63/119 (52.94%), Postives = 82/119 (68.91%), Query Frame = -3 Query: 119 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 475 K + AEV A ARY+ MS KVRRV+DQIRGRSY E L+ILE MPY+AC P+ K++ SA AN HN G A LV+++A + S +R RP+AQGR + I++PTCHITV + D+ Sbjct: 3 KLDTTAEVKAIARYVRMSPLKVRRVLDQIRGRSYREALIILEFMPYKACEPVLKVLRSAVANAEHNEGLEPADLVVSQAFADGGPSLRRFRPRAQGRAYQIRKPTCHITVAVAPALADN 121
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RL22_MICAN (50S ribosomal protein L22 OS=Microcystis aeruginosa (strain NIES-843) GN=rplV PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.990e-29 Identity = 63/112 (56.25%), Postives = 81/112 (72.32%), Query Frame = -3 Query: 122 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLD 457 EV A ARY+ MS KVRRV+DQIRGRSY E L+ILE MPYRAC PI K++ SA AN HN G + A+LV+++A + + KR RP+AQGR + I++PTCHITV + + D Sbjct: 8 EVKAIARYIRMSPLKVRRVLDQIRGRSYREALIILEFMPYRACDPILKVLRSAVANAEHNEGLDPATLVVSQAFADGGPTLKRFRPRAQGRAYQIRKPTCHITVAVAPSNKD 119
BLAST of CF832669 vs. ExPASy Swiss-Prot
Match: RL22_CYAA5 (50S ribosomal protein L22 OS=Cyanothece sp. (strain ATCC 51142) GN=rplV PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.599e-29 Identity = 60/106 (56.60%), Postives = 77/106 (72.64%), Query Frame = -3 Query: 140 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 457 E A ARY+ MS KVRRV+DQIRGRSY E L+ILE MPYRAC PI KL+ SA AN HN G + +LV+++A + S +R RP+AQGR + I++PTCHIT+ + Sbjct: 8 EAKAIARYIRMSPFKVRRVLDQIRGRSYREALIILEFMPYRACEPILKLLRSAVANAEHNQGLDPTTLVVSQAYADGGPSLRRYRPRAQGRAYQIRKPTCHITIAV 113 The following BLAST results are available for this feature:
BLAST of CF832669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832669 ID=CF832669; Name=CF832669; organism=Citrus sinensis; type=EST; length=501bpback to top |