CF832670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_MAIZE (50S ribosomal protein L22, chloroplastic OS=Zea mays GN=rpl22 PE=3 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 2.735e-26 Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 K V + + +HMS K +RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++ +L I KAEV+ +T K+ RP+A+GR + IK+ C+IT+VL Sbjct: 33 KFERVFKAQKRIHMSVFKAQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKTNLFITKAEVSRSTIMKKFRPRARGRSYSIKKTMCNITIVL 141
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_ANTFO (50S ribosomal protein L22, chloroplastic OS=Anthoceros formosae GN=rpl22 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.735e-26 Identity = 60/117 (51.28%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 28 KTN-KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 375 KTN E A A+++ +SA KVRRVI++IRGR YE+ MILE M YRACYP+ +L+ AAAN HN+G N+A V ++ +V+E T KR P+AQGR + I +PT HIT+V++ S Sbjct: 2 KTNYSNLETQALAKHIRISASKVRRVINEIRGRLYEQAPMILEFMLYRACYPVSQLLSLAAANASHNLGLNKADSVTSEVKVDEGTMLKRFEPRAQGRGYPIHKPTSHITIVIKKKS 118
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_ANEMR (50S ribosomal protein L22, plastid OS=Aneura mirabilis GN=rpl22 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.735e-26 Identity = 57/112 (50.89%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 31 TNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLR 366 T + ASA+Y+ MS HK RRV+DQIRGR+YE+ MILE MPYR C I +L+ SAAAN HN G ++ L I +V+ + KR R A+GR + I +PTCHIT+V+R Sbjct: 4 TTSNPRIEASAKYIRMSPHKARRVVDQIRGRAYEQAPMILEFMPYRVCDSISQLLSSAAANANHNFGLSKTDLFIDAIQVDGGSFLKRIRSGARGRTYPIHKPTCHITIVMR 115
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RL22_SYNJB (50S ribosomal protein L22 OS=Synechococcus sp. GN=rplV PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.573e-26 Identity = 56/107 (52.34%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLR 366 EV A ARY+ MS KVRRV+DQIRGR+Y + L++LE MPY AC P+ K++ SA AN HN G + LVI++A ++ KR RP+AQGR + I++ TCHIT+ +R Sbjct: 7 EVKAVARYIRMSPFKVRRVLDQIRGRTYADALILLEFMPYAACEPVRKVLRSAVANAEHNNGLDPRDLVISQAYADQGPVLKRFRPRAQGRAYPIRKRTCHITIAVR 113
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_THAPS (50S ribosomal protein L22, chloroplastic OS=Thalassiosira pseudonana GN=rpl22 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.573e-26 Identity = 56/109 (51.38%), Postives = 80/109 (73.39%), Query Frame = 1 Query: 49 VSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 375 V A A+Y+ +S HKVR+V+DQIRGRSY+E LMILE +PY A PI+++++S AAN +N ++ LVI++ +E KR RP+AQGR + I +PTCHITVV++ +S Sbjct: 7 VKAVAKYVRISPHKVRQVLDQIRGRSYQEALMILEFLPYDAGSPIWQVVHSVAANAKNNYNLDKKKLVISEIFADEGPKLKRIRPRAQGRAYKILKPTCHITVVVKSIS 115
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_WHEAT (50S ribosomal protein L22, chloroplastic OS=Triticum aestivum GN=rpl22 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.094e-26 Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 K V + + + MS K +RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T K+ RP+A+GR IK+ CHIT+VL Sbjct: 34 KFERVFKAQKRIPMSVFKAQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMKKFRPRARGRSFPIKKSMCHITIVL 142
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_HORVU (50S ribosomal protein L22, chloroplastic OS=Hordeum vulgare GN=rpl22 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.094e-26 Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 K V + + + MS K +RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T K+ RP+A+GR IK+ CHIT+VL Sbjct: 34 KFERVFKAQKRIPMSVFKAQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMKKFRPRARGRSFPIKKSMCHITIVL 142
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_CUSOB (50S ribosomal protein L22, plastid OS=Cuscuta obtusiflora GN=rpl22 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 7.959e-26 Identity = 60/112 (53.57%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 40 KAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 375 K E A ++ +SA K RRVID+IRGRSYEETL+ILEL+PYRA YPI K + AA+N + +L I+KAEVNE + K+ +P+A+GR IK+ TCHIT+VL D+S Sbjct: 6 KPESYAFSQNFPISADKARRVIDRIRGRSYEETLIILELLPYRAAYPILKFVCFAASNASSTSTSKKENLFISKAEVNERPAIKKLKPRARGRSFPIKKATCHITIVLTDLS 117
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_LOLPR (50S ribosomal protein L22, chloroplastic OS=Lolium perenne GN=rpl22 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.039e-25 Identity = 56/109 (51.38%), Postives = 78/109 (71.56%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 K + + + ++MS K +RV+D+IR R YEET+MIL LMPYRA YPI KL+YSA+AN H F++A+L I KAEV+ +T K+ RP+A+GR IK+ CHIT++L Sbjct: 34 KFERIFKAQKRINMSVFKAQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSASANATHYRNFDKANLFITKAEVSRSTIMKKFRPRARGRSFPIKKNMCHITIIL 142
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_PORYE (50S ribosomal protein L22, chloroplastic OS=Porphyra yezoensis GN=rpl22 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.358e-25 Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 31 TNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDM 372 T E A +Y+ +S HKVRRV+DQIRGR Y+E L+ILE MPYR C I +++ SAAAN HN G N+ L ++KA ++ + KR +P+AQGR I +PTCHIT+ + ++ Sbjct: 4 TKNVKETKAVGKYIRLSPHKVRRVLDQIRGRKYQEALIILEFMPYRVCSHIKQILESAAANAEHNDGLNKNQLFVSKAFADKGPTLKRFQPRAQGRAFPIHKPTCHITLGVSEL 117 The following BLAST results are available for this feature:
BLAST of CF832670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832670 ID=CF832670; Name=CF832670; organism=Citrus sinensis; type=EST; length=503bpback to top |