CF832670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_FAGEA (50S ribosomal protein L22, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=rpl22 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.265e-39 Identity = 77/123 (62.60%), Postives = 97/123 (78.86%), Query Frame = 1 Query: 22 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 R K EVSA +Y+ MS HK RRVIDQIRGRSY+ETLMILELMPYRACYPIFK+IYSAAAN HN GF + L++ KAEVN+ + K+ +P+A+GR ++IK+PTCHI+VVL+D+S + Y Sbjct: 2 RKKKKSLTEVSALGQYIPMSVHKARRVIDQIRGRSYKETLMILELMPYRACYPIFKIIYSAAANAKHNKGFEKEDLLVWKAEVNKGPTRKKLKPRARGRSYLIKKPTCHISVVLKDISYYEAY 124
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_OLIPU (50S ribosomal protein L22, chloroplastic OS=Olimarabidopsis pumila GN=rpl22 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.157e-39 Identity = 77/123 (62.60%), Postives = 93/123 (75.61%), Query Frame = 1 Query: 22 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 + K V A +Y+ MSAHK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR + IKR TCHIT+VL D+S +Y Sbjct: 4 KRKKKSYTSVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYQQY 126
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_GUIAB (50S ribosomal protein L22, chloroplastic OS=Guizotia abyssinica GN=rpl22 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.157e-39 Identity = 78/116 (67.24%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 384 + EV A +++ MSAHK RRVIDQIRGRSYEETL+ILELMPYRACYPIFKL+YSAAAN NMG NEA+LVI+KAEVN+ T KR + +A+GR I++PTCHIT+V++D+SLD+ Sbjct: 5 RTTEVYALGQHISMSAHKARRVIDQIRGRSYEETLIILELMPYRACYPIFKLVYSAAANASSNMGSNEANLVISKAEVNKGTIMKRLKHRARGRSFAIQKPTCHITIVMKDISLDE 120
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_CRUWA (50S ribosomal protein L22, chloroplastic OS=Crucihimalaya wallichii GN=rpl22 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.157e-39 Identity = 77/123 (62.60%), Postives = 93/123 (75.61%), Query Frame = 1 Query: 22 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 + K V A +Y+ MSAHK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR + IKR TCHIT+VL D+S +Y Sbjct: 4 KRKKKSYTSVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYQQY 126
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_CAPBU (50S ribosomal protein L22, chloroplastic OS=Capsella bursa-pastoris GN=rpl22 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.157e-39 Identity = 79/126 (62.70%), Postives = 96/126 (76.19%), Query Frame = 1 Query: 22 RNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSL---DDEY 390 + K EV A +Y+ MSAHK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR + IKR TCHIT+VL D+S ++EY Sbjct: 4 KRKKKSYTEVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYQQNEEY 129
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_ARAHI (50S ribosomal protein L22, chloroplastic OS=Arabis hirsuta GN=rpl22 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.818e-39 Identity = 79/124 (63.71%), Postives = 94/124 (75.81%), Query Frame = 1 Query: 22 RNKTNKK-AEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 +NK K V A +Y+ MSAHK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR + IKR TCHIT+VL D S +Y Sbjct: 3 KNKKQKSYTSVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDTSFYQQY 126
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_NASOF (50S ribosomal protein L22, chloroplastic OS=Nasturtium officinale GN=rpl22 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.680e-39 Identity = 77/121 (63.64%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 28 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 K V A +Y+ MSAHK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR + IKR TCHIT+VL D+S +Y Sbjct: 6 KKKSYTSVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYQQY 126
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_BARVE (50S ribosomal protein L22, chloroplastic OS=Barbarea verna GN=rpl22 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.680e-39 Identity = 77/121 (63.64%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 28 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 K V A +Y+ MSAHK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN GF E +LVI+KAEVN+ + K+ +P+A+GR + IKR TCHIT+VL D+S +Y Sbjct: 6 KKKSYTSVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYQQY 126
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_NANDO (50S ribosomal protein L22, chloroplastic OS=Nandina domestica GN=rpl22 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.806e-39 Identity = 75/119 (63.03%), Postives = 97/119 (81.51%), Query Frame = 1 Query: 40 KAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEYAV 396 + EV A +++ MSAHK RRVIDQIRGR Y+E LMILELMPYRACYPIFKL+YSAAAN +N GFN+ +L+I++AEVNE T K+ +P+A+GR + IKRPTCHIT+VL+D+S D + + Sbjct: 4 EVEVYALGQHICMSAHKARRVIDQIRGRPYDEILMILELMPYRACYPIFKLVYSAAANATNNKGFNKTALIISQAEVNEGTVVKKLKPRARGRSYPIKRPTCHITIVLQDISKDKNFYI 122
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_DRANE (50S ribosomal protein L22, chloroplastic OS=Draba nemorosa GN=rpl22 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.806e-39 Identity = 79/124 (63.71%), Postives = 94/124 (75.81%), Query Frame = 1 Query: 22 RNKTNKK-AEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 390 +NK K V A +Y+ MSAHK RRVIDQIRGRSYEE LMILELMPYR CYPIFKL+YSAAAN HN G E +LVI+KAEVN+ + K+ +P+A+GR + IKR TCHIT+VL D SL +Y Sbjct: 3 KNKKKKSYTSVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGLKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDTSLYQQY 126 The following BLAST results are available for this feature:
BLAST of CF832670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832670 ID=CF832670; Name=CF832670; organism=Citrus sinensis; type=EST; length=503bpback to top |