CF832670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_LEMMI (50S ribosomal protein L22, chloroplastic OS=Lemna minor GN=rpl22 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.890e-35 Identity = 76/116 (65.52%), Postives = 90/116 (77.59%), Query Frame = 1 Query: 28 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 375 K + + EV A A+ +HMS K RRVIDQIRGRSYEETLMILELMPYRA + I KL+YSAAAN +N+G NEA I+KAEVN T KR RP+A+GR + IKRPTCHIT+VL+D S Sbjct: 4 KNSTRTEVKALAQNIHMSPFKARRVIDQIRGRSYEETLMILELMPYRAAFTILKLVYSAAAN-ANNLGLNEAESFISKAEVNGGTVLKRLRPRARGRSYRIKRPTCHITIVLKDKS 118
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_CUSRE (50S ribosomal protein L22, plastid OS=Cuscuta reflexa GN=rpl22 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.224e-35 Identity = 71/119 (59.66%), Postives = 93/119 (78.15%), Query Frame = 1 Query: 28 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 384 + K E+ A +++ MSA K RRVIDQIRGRSYEETLMILELMPYRA YPI KL+YSAA+N + + NEA+L I+KAEVN+ + K+ +P+A+GR + IKRPTCHIT++L+D+S D Sbjct: 2 RKTKAPEIYALGQHISMSADKARRVIDQIRGRSYEETLMILELMPYRAAYPILKLVYSAASNASYTLDSNEANLFISKAEVNQGPAIKKLKPRARGRSYPIKRPTCHITILLKDISFYD 120
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_CYCTA (50S ribosomal protein L22, chloroplastic OS=Cycas taitungensis GN=rpl22 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.225e-34 Identity = 67/116 (57.76%), Postives = 90/116 (77.59%), Query Frame = 1 Query: 28 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 375 K + ++ A A+++ MS H+ RRVIDQ+R RSYE+ LMILELMPYRACYPI +LI SAAAN HN+G N+A+L +++AEVNE KR +P+AQGR + I++PTCHIT+VL + S Sbjct: 3 KNSSSPKIRALAKHIRMSTHRARRVIDQVRNRSYEQALMILELMPYRACYPILQLISSAAANANHNIGLNKANLFVSRAEVNEGAILKRSQPRAQGRGYPIQKPTCHITIVLEERS 118
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_PINKO (50S ribosomal protein L22, chloroplastic OS=Pinus koraiensis GN=rpl22 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.037e-33 Identity = 69/118 (58.47%), Postives = 91/118 (77.12%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEYAVS 399 E+ A AR + MSAHK RRVI+QIRGRSY + LMILELMPY ACYPI +LI+SAAAN HNMG N+A+L++ + EVNE KR +P+AQGR + I++PTCHIT+V ++S ++ +S Sbjct: 12 EIRALARNIRMSAHKARRVINQIRGRSYGQALMILELMPYGACYPISQLIHSAAANANHNMGLNKANLLVGRVEVNEGAVLKRIQPRAQGRGYPIQKPTCHITIVSEEISRSNDPIMS 129
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_PINTH (50S ribosomal protein L22, chloroplastic OS=Pinus thunbergii GN=rpl22 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.354e-33 Identity = 69/118 (58.47%), Postives = 91/118 (77.12%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEYAVS 399 E+ A AR + MSAHK RRVI+QIRGRSY + LMILELMPY ACYPI +LI+SAAAN HNMG N+A+L++ + EVNE KR +P+AQGR + I++PTCHIT+V ++S ++ +S Sbjct: 12 EIRALARNIRMSAHKARRVINQIRGRSYGQALMILELMPYGACYPISQLIHSAAANANHNMGLNKANLLVGRVEVNEGAVFKRIQPRAQGRGYPIQKPTCHITIVSEEISRSNDPIMS 129
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_PICAB (50S ribosomal protein L22, chloroplastic OS=Picea abies GN=rpl22 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.017e-33 Identity = 68/118 (57.63%), Postives = 92/118 (77.97%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEYAVS 399 E+ A AR + MSAHK R+VI+QIRG SY + LMILELMPY ACYPI +LI+SAAAN HNMG N+A+L++++ EVNE KR +P+AQGR + I++PTCHIT+VL ++S ++ +S Sbjct: 12 EIRALARNIRMSAHKARKVINQIRGCSYGQALMILELMPYGACYPISQLIHSAAANANHNMGLNKANLLVSRVEVNEGAVFKRVQPRAQGRGYPIQKPTCHITIVLEEISRSNDPIMS 129
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_PHAAO (50S ribosomal protein L22, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rpl22 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.147e-33 Identity = 68/112 (60.71%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 34 NKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 N+ E A+ + MS K RRVIDQIRGRSYEE LMILELMPYRA YPI KL+YSAAAN HNMG NE L I+KAEVN T K+ +P+A+GR ++IK+ TCHI + L++ Sbjct: 4 NENREAKVLAQNICMSVFKARRVIDQIRGRSYEEALMILELMPYRASYPILKLVYSAAANASHNMGLNEVDLFISKAEVNRGTIMKKLKPRARGRSYLIKKTTCHIKIFLKE 115
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_PSINU (50S ribosomal protein L22, chloroplastic OS=Psilotum nudum GN=rpl22 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.554e-32 Identity = 65/113 (57.52%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 375 KK EV A A+Y+ MSAHKVRRVI+QIRGRSYEE L+ LE +PYRACYP+ +L+ SAAAN +N+G + +L+I++A+V+EA+ +KR +P+AQGR + I++ TCHIT+ +R+ S Sbjct: 3 KKKEVRALAKYVKMSAHKVRRVINQIRGRSYEEALISLEFLPYRACYPLLQLVSSAAANANNNLGLKKDTLLISEAKVDEASVSKRFQPRAQGRAYSIQKDTCHITIKIRERS 115
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_PHYPA (50S ribosomal protein L22, chloroplastic OS=Physcomitrella patens GN=rpl22 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 5.690e-32 Identity = 63/108 (58.33%), Postives = 86/108 (79.63%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRD 369 EV A A+++ MSAHK RRV++QIRGRSYE+ LMILE MPYRACYPI +L+ SAAAN HN+ N A+L+I++A+V+E KR +P+AQGR + I +PTCHIT+ +++ Sbjct: 9 EVRALAKHIRMSAHKARRVVNQIRGRSYEQALMILEFMPYRACYPILQLVSSAAANANHNLNLNRANLIISEAKVDEGPVLKRFQPRAQGRGYPIHKPTCHITITVKN 116
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RL22_CYAP8 (50S ribosomal protein L22 OS=Cyanothece sp. (strain PCC 8801) GN=rplV PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.706e-32 Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 43 AEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 AEV A ARY+ MS HKVRRV+DQIRGRSY E L+ILE MPYRAC PI K++ SAAAN HN G + A+LV+++A + S +R RP+AQGR + I++PTCHITV + Sbjct: 7 AEVKAIARYIRMSPHKVRRVLDQIRGRSYREALIILEFMPYRACDPILKVLRSAAANAEHNEGLDRATLVVSQAYADGGPSLRRYRPRAQGRAYQIRKPTCHITVAV 113 The following BLAST results are available for this feature:
BLAST of CF832670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832670 ID=CF832670; Name=CF832670; organism=Citrus sinensis; type=EST; length=503bpback to top |