CF832670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_ODOSI (50S ribosomal protein L22, chloroplastic OS=Odontella sinensis GN=rpl22 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.894e-27 Identity = 57/109 (52.29%), Postives = 80/109 (73.39%), Query Frame = 1 Query: 49 VSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 375 V A A+Y+ MS HKVRRV++QIRGRSY+E LMILE +PY A P++++++SAAAN +N G ++ L+I + NE KR RP+AQGR + I +PTCHITV+++ S Sbjct: 7 VKAVAKYIRMSPHKVRRVLNQIRGRSYQEALMILEFLPYDAGGPVWQVVHSAAANAKNNYGLDKKKLIIEEVFANEGPKLKRIRPRAQGRAYSILKPTCHITVIVKGTS 115
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_AGRST (50S ribosomal protein L22, chloroplastic OS=Agrostis stolonifera GN=rpl22 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.220e-27 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 K V + + +HMS K +RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T K+ RP+A+GR IK+ CHIT+VL Sbjct: 34 KFERVFKAQKRIHMSVFKAQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMKKFRPRARGRSFPIKKSMCHITIVL 142
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RL22_TRIEI (50S ribosomal protein L22 OS=Trichodesmium erythraeum (strain IMS101) GN=rplV PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.512e-27 Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 384 EV A ARY+ MS KVRRV+DQIRG SY E L+ILE MPYR+C PI K++ SA AN +N G + +LVI+KA ++ R RP+AQGR + I++PTCHITV + + +DD Sbjct: 8 EVKAIARYIRMSPFKVRRVLDQIRGISYREALIILEFMPYRSCVPIRKVLCSAVANAENNKGIDPDTLVISKAFADQGPCLPRYRPRAQGRAYKIRKPTCHITVAVASL-VDD 119
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RL22_ANAVT (50S ribosomal protein L22 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplV PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.512e-27 Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 EV A AR++ MS +KVRRV+DQIRG SY E L+ILE MPYRA P+ L+ SAAAN HN G + A LVI +A ++ KR +P+AQGR + I++PTCHIT+ + Sbjct: 7 EVKAIARFIRMSPYKVRRVLDQIRGLSYREALIILEFMPYRATEPVLTLLRSAAANAEHNAGLDRAELVITQAYADQGPVLKRFQPRAQGRAYQIRKPTCHITLAV 112
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RL22_ANASP (50S ribosomal protein L22 OS=Anabaena sp. (strain PCC 7120) GN=rplV PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.512e-27 Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = 1 Query: 46 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 EV A AR++ MS +KVRRV+DQIRG SY E L+ILE MPYRA P+ L+ SAAAN HN G + A LVI +A ++ KR +P+AQGR + I++PTCHIT+ + Sbjct: 7 EVKAIARFIRMSPYKVRRVLDQIRGLSYREALIILEFMPYRATEPVLTLLRSAAANAEHNAGLDRAELVITQAYADQGPVLKRFQPRAQGRAYQIRKPTCHITLAV 112
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_PORPU (50S ribosomal protein L22, chloroplastic OS=Porphyra purpurea GN=rpl22 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.512e-27 Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 25 NKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITV 357 N T E A +Y+ +S HKVRRV+DQIRGR Y+E L+ILE MPYRACY I +++ SA AN HN G N+ L I KA ++ + KR +P+AQGR I +PTCHIT+ Sbjct: 2 NITKNLKETKAVGKYIRLSPHKVRRVLDQIRGRKYQEALIILEFMPYRACYHIKQILESAGANAEHNNGLNKNQLFITKAFADKGPTLKRFQPRAQGRAFPIHKPTCHITL 112
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_ORYSJ (50S ribosomal protein L22, chloroplastic OS=Oryza sativa subsp. japonica GN=rpl22 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.512e-27 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 K V + + +HMS KV+RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T + RP+A+GR IK+ CHIT+VL Sbjct: 34 KFERVFKAQKRIHMSVFKVQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMNKFRPRARGRSSPIKKTMCHITIVL 142
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_ORYSI (50S ribosomal protein L22, chloroplastic OS=Oryza sativa subsp. indica GN=rpl22 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.512e-27 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 K V + + +HMS KV+RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T + RP+A+GR IK+ CHIT+VL Sbjct: 34 KFERVFKAQKRIHMSVFKVQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMNKFRPRARGRSSPIKKTMCHITIVL 142
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_ORYSA (50S ribosomal protein L22, chloroplastic OS=Oryza sativa GN=rpl22 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.512e-27 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 K V + + +HMS KV+RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T + RP+A+GR IK+ CHIT+VL Sbjct: 34 KFERVFKAQKRIHMSVFKVQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMNKFRPRARGRSSPIKKTMCHITIVL 142
BLAST of CF832670 vs. ExPASy Swiss-Prot
Match: RK22_ORYNI (50S ribosomal protein L22, chloroplastic OS=Oryza nivara GN=rpl22 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.512e-27 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 1 Query: 37 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVL 363 K V + + +HMS KV+RV+D+IR R YEET+MIL LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T + RP+A+GR IK+ CHIT+VL Sbjct: 34 KFERVFKAQKRIHMSVFKVQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMNKFRPRARGRSSPIKKTMCHITIVL 142 The following BLAST results are available for this feature:
BLAST of CF832670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832670 ID=CF832670; Name=CF832670; organism=Citrus sinensis; type=EST; length=503bpback to top |