CF832671

Overview
NameCF832671
Unique NameCF832671
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: PFPI_PYRHO (Intracellular protease 1 OS=Pyrococcus horikoshii GN=pfpI PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.853e-11
Identity = 50/154 (32.47%), Postives = 72/154 (46.75%), Query Frame = 2
Query:   41 KVLVPVANGSEPIEAEITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALLSDCRYAVFDLIALPGGM-PGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASVESRVQEDGKVVTSRGP 499
            KVL   AN  E +E       L+  G +V +AS E+   +   HG  +  D          FD + LPGG  P    LNE  V  SI +K+ S G+  A++C  P + + + G+L G   T YP   + +  A    V++ V  DG  V+SR P
Sbjct:    2 KVLFLTANEFEDVELIYPYHRLKEEGHEVYIASFERGT-ITGKHGYSVKVDLTFDKVNPEEFDALVLPGGRAPERVRLNEKAV--SIARKMFSEGKPVASICHGPQILISA-GVLRGRKGTSYPGIKDDMINAGVEWVDAEVVVDGNWVSSRVP 151          
BLAST of CF832671 vs. ExPASy Swiss-Prot
Match: PFPI_PYRAB (Intracellular protease 1 OS=Pyrococcus abyssi GN=pfpI PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.866e-11
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 2
Query:   41 KVLVPVANGSEPIEAEITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALLSDCRYAVFDLIALPGGM-PGATDLNESEVLKSIVKKLASAGRLYAAVCASPAVALGSWGLL*GLNATCYPSFMERLAPACAASVESRVQEDGKVVTSRGPG 502
            +VL+  A+  E +E       L+  G +V VAS ++ + +   HG  +  D    +     FD + LPGG  P    LNE  V   I KK+ S G+  A++C  P + + + G+L G   T YP   + +  A    V++ V  DG  V+SR PG
Sbjct:    2 RVLILSADQFEDVELIYPYHRLKEEGHEVLVASFKRGV-ITGKHGYTVNVDLAFEEVNPDEFDALVLPGGRAPERVRLNEKAV--EIAKKMFSEGKPVASICHGPQILISA-GVLRGRRGTSYPGIKDDMINAGVDWVDAEVVVDGNWVSSRVPG 152          
The following BLAST results are available for this feature:
BLAST of CF832671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PFPI_PYRHO2.853e-1132.47Intracellular protease 1 OS=Pyrococcus horikoshii ... [more]
PFPI_PYRAB4.866e-1131.61Intracellular protease 1 OS=Pyrococcus abyssi GN=p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02D23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832671 ID=CF832671; Name=CF832671; organism=Citrus sinensis; type=EST; length=532bp
CTCCTTCTCAGCTGCAGCTACAATGTCTTCCACTTCCGAAAAGGTTTTGG
TGCCTGTTGCGAACGGGAGTGAGCCGATTGAGGCCGAGATAACGATTGAT
GTTTTGAGAAGGTCTGGAGCTGACGTCACGGTTGCATCTGTGGAGAAACA
GCTTCGTGTCGACGCGTGTCATGGTGTCAAGATTGTCGCTGATGCTCTCC
TGTCTGACTGCCGCTACGCCGTTTTTGATCTTATAGCTCTTCCCGGTGGC
ATGCCCGGTGCTACCGATCTGAACGAATCCGAGGTATTAAAAAGCATTGT
GAAGAAGCTCGCCTCAGCTGGGCGTCTTTATGCTGCTGTCTGTGCTTCAC
CTGCTGTGGCATTAGGGTCTTGGGGTCTGTTGTAGGGATTGAATGCTACT
TGTTATCCGTCATTTATGGAGCGATTAGCTCCTGCTTGTGCAGCATCTGT
TGAATCAAGAGTACAGGAGGATGGTAAAGTTGTTACTAGTCGTGGACCGG
GCACTACCATGGAGTTTGCCGTTGCACTTGTT
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