CF832674

Overview
NameCF832674
Unique NameCF832674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_BORBR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bordetella bronchiseptica GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.271e-17
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            +DI  I D LPHR+P LL+DRV+E  PG S VAIKNV+IN+ FF GHFP  P+MPGVL+VE
Sbjct:    3 LDIKGIMDRLPHRYPMLLIDRVLEMVPGKSIVAIKNVSINEPFFTGHFPHHPVMPGVLIVE 63          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_BACP2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus pumilus (strain SAFR-032) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.271e-17
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++D  QI+DI+PHR+PFLLVDR++E      AV IKNVT+N+ FF GHFP  P+MPGVL+VE
Sbjct:    1 MLDAQQIQDIIPHRYPFLLVDRILEVEGEKRAVGIKNVTVNEEFFNGHFPGYPVMPGVLIVE 62          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_SINMW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Sinorhizobium medicae (strain WSM419) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16
Identity = 38/61 (62.30%), Postives = 49/61 (80.33%), Query Frame = 2
Query:  452 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEG 634
            DI +I  +LPHR+PFLLVDR+IE +   SA+ IKNVT N+  F GHFP++PIMPGVL++EG
Sbjct:   12 DIQEILKLLPHRYPFLLVDRIIEIDSDNSAIGIKNVTANEPHFTGHFPEKPIMPGVLLIEG 72          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_RICRS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia rickettsii (strain Sheila Smith) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI +I D +PHR+PFLLVDRV++ +P  S   IKNVT+N+  F GHFP RP+MPGVLMVE
Sbjct:    2 IIDITEIMDWIPHRYPFLLVDRVLKIDPNKSITGIKNVTVNEPQFTGHFPARPVMPGVLMVE 63          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_RICRO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia rickettsii (strain Iowa) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI +I D +PHR+PFLLVDRV++ +P  S   IKNVT+N+  F GHFP RP+MPGVLMVE
Sbjct:    2 IIDITEIMDWIPHRYPFLLVDRVLKIDPNKSITGIKNVTVNEPQFTGHFPARPVMPGVLMVE 63          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_RICRI ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia rickettsii GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI +I D +PHR+PFLLVDRV++ +P  S   IKNVT+N+  F GHFP RP+MPGVLMVE
Sbjct:    2 IIDITEIMDWIPHRYPFLLVDRVLKIDPNKSITGIKNVTVNEPQFTGHFPARPVMPGVLMVE 63          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_RICPU ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia peacockii (strain Rustic) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI +I D +PHR+PFLLVDRV++ +P  S   IKNVT+N+  F GHFP RP+MPGVLMVE
Sbjct:    2 IIDITEIMDWIPHRYPFLLVDRVLKIDPNKSITGIKNVTVNEPQFTGHFPARPVMPGVLMVE 63          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_RICPR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia prowazekii GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16
Identity = 37/62 (59.68%), Postives = 50/62 (80.65%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++ I +I D++PHR+PFLLVDRV++ +P  S + IKNVT+N+  F GHFP RP+MPGVLMVE
Sbjct:    2 IIAITEIMDLIPHRYPFLLVDRVLKIDPNKSIIGIKNVTVNEPQFTGHFPARPVMPGVLMVE 63          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_RICM5 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia massiliae (strain Mtu5) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI +I D +PHR+PFLLVDRV++ +P  S   IKNVT+N+  F GHFP RP+MPGVLMVE
Sbjct:    2 IIDITEIMDWIPHRYPFLLVDRVLKIDPNKSITGIKNVTVNEPQFTGHFPARPVMPGVLMVE 63          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_RICCN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia conorii GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI +I D +PHR+PFLLVDRV++ +P  S   IKNVT+N+  F GHFP RP+MPGVLMVE
Sbjct:    2 IIDITEIMDWIPHRYPFLLVDRVLKIDPNKSITGIKNVTVNEPQFTGHFPARPVMPGVLMVE 63          
The following BLAST results are available for this feature:
BLAST of CF832674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_BORBR9.271e-1765.57(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACP29.271e-1761.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SINMW1.211e-1662.30(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RICRS1.211e-1661.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RICRO1.211e-1661.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RICRI1.211e-1661.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RICPU1.211e-1661.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RICPR1.211e-1659.68(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RICM51.211e-1661.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RICCN1.211e-1661.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02D24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832674 ID=CF832674; Name=CF832674; organism=Citrus sinensis; type=EST; length=665bp
CTTTTGCCAACTCCTAATCCCATCATTGGTCTCTCCTACTAGTACCCCTA
GACTATCTCGTTAATGTCGCCGCCGACCAACTGCCATGGGTTTGATTTAA
ATGTCTATTCTTACATCTCTGCCTCATTTTATTAGCTAACATATTAATCC
TCAATTGAATCAATAGAATCCAATCTCTCAGTTCTTCTCTCTTACAATGG
CCACTACCCCTGCTGCTTCTTTTGCCAATTCACTTTTATCTCTCAATTCT
CATCGACCAAACCCAAATGCCTCCTCTATTCCAAAACCCAACACTCTCTC
CATCCAATTTGACAAGAAGAAGAATCAACAACAACAGCAGCACCAACGAC
ATGCTCGTTTCACCACATTTTGTTCTTTGGACGCTGAACCCAAAGATCCC
ATCGAAGATAAACCCATCGAACTTCGGTACCAGGCATTTCCTACAGTGAT
GGACATTAACCAGATTCGTGACATTTTGCCACACAGGTTCCCATTTCTTT
TGGTGGATAGAGTTATTGAATACAATCCAGGAGTTTCAGCTGTTGCTATT
AAGAATGTTACTATTAATGATAACTTCTTTCCTGGCCATTTTCCTGATAG
GCCAATTATGCCCGGTGTTCTCATGGTTGAGGGCAATGGCACAGGTTGGT
GGCTTGGTTATGCTG
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