CF832674

Overview
NameCF832674
Unique NameCF832674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_ALKOO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Alkaliphilus oremlandii (strain OhILAs) GN=fabZ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.581e-16
Identity = 40/63 (63.49%), Postives = 52/63 (82.54%), Query Frame = 2
Query:  449 MDIN--QIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            M++N  +I+ I+PHR+PFLLVD++I+   G  AV IKNVTIN+ FF GHFPD+PIMPGVL+VE
Sbjct:    1 MNLNSIEIQKIIPHRYPFLLVDKIIDMEVGKRAVGIKNVTINEPFFQGHFPDQPIMPGVLIVE 63          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_RICTY ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia typhi GN=fabZ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++ I +I D++PHR+PFLLVDRV++ +P  S   IKNVT+N+  F GHFP RP+MPGVLMVE
Sbjct:    2 IIAITEIMDLIPHRYPFLLVDRVLKIDPNKSITGIKNVTVNEPQFTGHFPTRPVMPGVLMVE 63          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_RHOPT ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rhodopseudomonas palustris (strain TIE-1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEG 634
            +DIN I   LPHRFPFLL+DRVI      S + IKNVT+N+  F GHFP+RP+ PGVLM+EG
Sbjct:   10 VDINTILKTLPHRFPFLLIDRVINIREDYSGIGIKNVTVNEPAFQGHFPERPVYPGVLMIEG 71          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_RHOPA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rhodopseudomonas palustris GN=fabZ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEG 634
            +DIN I   LPHRFPFLL+DRVI      S + IKNVT+N+  F GHFP+RP+ PGVLM+EG
Sbjct:   10 VDINTILKTLPHRFPFLLIDRVINIREDYSGIGIKNVTVNEPAFQGHFPERPVYPGVLMIEG 71          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_POLNA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Polaromonas naphthalenivorans (strain CJ2) GN=fabZ PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16
Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            MDI+QI  +LPHR+P LLVDRV+E   G    A+KNVTIN+ FF GHFP  P+MPGVLM+E
Sbjct:    1 MDIHQILKLLPHRYPILLVDRVLEIETGKRIKALKNVTINEPFFMGHFPKHPVMPGVLMIE 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_PELTS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=fabZ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16
Identity = 35/62 (56.45%), Postives = 50/62 (80.65%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DINQI++I+PHR+PFLLVDR++    G  AV +KNV+ N+ +F GHFP  P+MPGVL++E
Sbjct:    1 MLDINQIKEIIPHRYPFLLVDRILSVEDGRKAVGLKNVSANEPYFQGHFPGYPVMPGVLIIE 62          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_GLUOX ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Gluconobacter oxydans GN=fabZ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16
Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 2
Query:  440 PTVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            P  +DI +I   +PHR+PFLL+D+++E + G SA+ IKNVT+N+ FF GHFP  P+MPGVL+VE
Sbjct:   25 PQSIDILKIMQSIPHRYPFLLIDKMVEIHAGQSAIGIKNVTVNEPFFQGHFPSHPVMPGVLIVE 88          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_DECAR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Dechloromonas aromatica (strain RCB) GN=fabZ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            MDI +I + LPHR+PFLLVDRV+E  PG S  A KNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MDIIEILEHLPHRYPFLLVDRVLEIEPGKSIHAYKNVTINEPFFVGHFPHHPVMPGVLIME 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_COXBU ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Coxiella burnetii GN=fabZ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            VM+I  I+  +PHR+PFLL+DRVI+     S VAIKNVT+N+ FF GHFP RP+MPGVL++E
Sbjct:    3 VMNITDIKKYIPHRYPFLLIDRVIKIEKDKSLVAIKNVTVNEPFFTGHFPVRPVMPGVLIIE 64          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_COXB2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Coxiella burnetii (strain CbuG_Q212) GN=fabZ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            VM+I  I+  +PHR+PFLL+DRVI+     S VAIKNVT+N+ FF GHFP RP+MPGVL++E
Sbjct:    3 VMNITDIKKYIPHRYPFLLIDRVIKIEKDKSLVAIKNVTVNEPFFTGHFPVRPVMPGVLIIE 64          
The following BLAST results are available for this feature:
BLAST of CF832674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_ALKOO1.581e-1663.49(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RICTY2.065e-1659.68(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RHOPT2.065e-1661.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RHOPA2.065e-1661.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_POLNA2.065e-1663.93(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PELTS2.065e-1656.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_GLUOX2.065e-1656.25(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_DECAR2.065e-1665.57(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_COXBU2.065e-1661.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_COXB22.065e-1661.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02D24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832674 ID=CF832674; Name=CF832674; organism=Citrus sinensis; type=EST; length=665bp
CTTTTGCCAACTCCTAATCCCATCATTGGTCTCTCCTACTAGTACCCCTA
GACTATCTCGTTAATGTCGCCGCCGACCAACTGCCATGGGTTTGATTTAA
ATGTCTATTCTTACATCTCTGCCTCATTTTATTAGCTAACATATTAATCC
TCAATTGAATCAATAGAATCCAATCTCTCAGTTCTTCTCTCTTACAATGG
CCACTACCCCTGCTGCTTCTTTTGCCAATTCACTTTTATCTCTCAATTCT
CATCGACCAAACCCAAATGCCTCCTCTATTCCAAAACCCAACACTCTCTC
CATCCAATTTGACAAGAAGAAGAATCAACAACAACAGCAGCACCAACGAC
ATGCTCGTTTCACCACATTTTGTTCTTTGGACGCTGAACCCAAAGATCCC
ATCGAAGATAAACCCATCGAACTTCGGTACCAGGCATTTCCTACAGTGAT
GGACATTAACCAGATTCGTGACATTTTGCCACACAGGTTCCCATTTCTTT
TGGTGGATAGAGTTATTGAATACAATCCAGGAGTTTCAGCTGTTGCTATT
AAGAATGTTACTATTAATGATAACTTCTTTCCTGGCCATTTTCCTGATAG
GCCAATTATGCCCGGTGTTCTCATGGTTGAGGGCAATGGCACAGGTTGGT
GGCTTGGTTATGCTG
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