CF832674

Overview
NameCF832674
Unique NameCF832674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_CHLMU ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Chlamydia muridarum GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14
Identity = 37/63 (58.73%), Postives = 50/63 (79.37%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGV-SAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            V+ I  I+++LPHR+PFLLVD+++ Y+    S VA KNVTIN+ FF GHFP+ PIMPGVL++E
Sbjct:    6 VLGIQDIQNLLPHRYPFLLVDKILSYDLNTRSIVAQKNVTINEPFFVGHFPEAPIMPGVLILE 68          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_CAUSK ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Caulobacter sp. (strain K31) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14
Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            +DI +I + +PHR+PFLLVDR  +Y P  S V IK VTIN+ FF GHFP  P+MPGVL++E
Sbjct:   18 IDIAEILNRIPHRYPFLLVDRAEDYRPHQSIVGIKCVTINEPFFQGHFPGNPVMPGVLIIE 78          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_BLOPB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Blochmannia pennsylvanicus (strain BPEN) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            V+ I ++ ++LPHRFPFLLVDRV+ +  G    A+KNV+ N+ FF GHFP +PI PGVL++E
Sbjct:    7 VLHIEEVLELLPHRFPFLLVDRVLNFEKGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILE 68          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_BARBK ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14
Identity = 33/61 (54.10%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            +DI ++  +LPHR+PFLL+DR+IE +    A+ IKNVT+N+  F GHFP+ P+MPGVL++E
Sbjct:   13 IDIVKLLSVLPHRYPFLLIDRIIEIDGDRKAIGIKNVTVNEPHFVGHFPENPVMPGVLILE 73          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_ALKMQ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Alkaliphilus metalliredigens (strain QYMF) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14
Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 2
Query:  449 MDIN--QIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            M++N  +I+ I+PHR+PFLLVD+++E   G   V IKNVT N+ FF GHFP  PIMPGVLM E
Sbjct:    1 MELNNIEIQKIIPHRYPFLLVDKMVEVELGKRGVGIKNVTANEPFFQGHFPGNPIMPGVLMTE 63          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_WOLSU ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Wolinella succinogenes GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.933e-14
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 2
Query:  452 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEG 634
            D+ +I++ILPHRFPFLLVDRV       S  A KN+TIN+  F GHFP +P+ PGVL++EG
Sbjct:    4 DVQKIKEILPHRFPFLLVDRVTALTSEESIEAYKNITINEEVFQGHFPIKPVYPGVLVIEG 64          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STAES ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.933e-14
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 2
Query:  443 TVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            T+ D NQI+ I+PHR PFLL+D+++EY  G   V +K V+ N+ FF GHFP+  +MPGVL+ E
Sbjct:    3 TIFDYNQIKQIIPHRQPFLLIDKIVEYEEGKRCVGLKQVSGNEPFFQGHFPNYAVMPGVLITE 65          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STAEQ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.933e-14
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 2
Query:  443 TVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            T+ D NQI+ I+PHR PFLL+D+++EY  G   V +K V+ N+ FF GHFP+  +MPGVL+ E
Sbjct:    3 TIFDYNQIKQIIPHRQPFLLIDKIVEYEEGKRCVGLKQVSGNEPFFQGHFPNYAVMPGVLITE 65          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_SODGM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Sodalis glossinidius (strain morsitans) GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.933e-14
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV+ N+ FF GHFP +PI PGVL++E
Sbjct:    8 LHIEEILELLPHRFPFLLVDRVLDFEKGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILE 68          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_SILPO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Silicibacter pomeroyi GN=fabZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.933e-14
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  452 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            DI  I+ ILPHR+PFLLVD+V+E +   SAV IKNVT+N+  F GHFP  PIMPGV +VE
Sbjct:    9 DIQLIQRILPHRYPFLLVDKVVEIDGYSSAVGIKNVTMNEPHFQGHFPGTPIMPGVTIVE 68          
The following BLAST results are available for this feature:
BLAST of CF832674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_CHLMU1.480e-1458.73(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CAUSK1.480e-1459.02(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BLOPB1.480e-1454.84(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BARBK1.480e-1454.10(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ALKMQ1.480e-1458.73(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_WOLSU1.933e-1457.38(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STAES1.933e-1452.38(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STAEQ1.933e-1452.38(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SODGM1.933e-1455.74(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SILPO1.933e-1463.33(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02D24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832674 ID=CF832674; Name=CF832674; organism=Citrus sinensis; type=EST; length=665bp
CTTTTGCCAACTCCTAATCCCATCATTGGTCTCTCCTACTAGTACCCCTA
GACTATCTCGTTAATGTCGCCGCCGACCAACTGCCATGGGTTTGATTTAA
ATGTCTATTCTTACATCTCTGCCTCATTTTATTAGCTAACATATTAATCC
TCAATTGAATCAATAGAATCCAATCTCTCAGTTCTTCTCTCTTACAATGG
CCACTACCCCTGCTGCTTCTTTTGCCAATTCACTTTTATCTCTCAATTCT
CATCGACCAAACCCAAATGCCTCCTCTATTCCAAAACCCAACACTCTCTC
CATCCAATTTGACAAGAAGAAGAATCAACAACAACAGCAGCACCAACGAC
ATGCTCGTTTCACCACATTTTGTTCTTTGGACGCTGAACCCAAAGATCCC
ATCGAAGATAAACCCATCGAACTTCGGTACCAGGCATTTCCTACAGTGAT
GGACATTAACCAGATTCGTGACATTTTGCCACACAGGTTCCCATTTCTTT
TGGTGGATAGAGTTATTGAATACAATCCAGGAGTTTCAGCTGTTGCTATT
AAGAATGTTACTATTAATGATAACTTCTTTCCTGGCCATTTTCCTGATAG
GCCAATTATGCCCGGTGTTCTCATGGTTGAGGGCAATGGCACAGGTTGGT
GGCTTGGTTATGCTG
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