CF832674

Overview
NameCF832674
Unique NameCF832674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_SYNFM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=fabZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            MDI +I   LPHR+PFLLVDR++E       V +KNVTIN+ FF GHFP  PIMPGVL++E
Sbjct:    1 MDIAKIMGYLPHRYPFLLVDRILELT-SEEIVGLKNVTINEPFFQGHFPGEPIMPGVLIIE 60          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STRZT ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=fabZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI  I++ LPHR+P LLVDRV+E +   + VAIKNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MIDIQGIKEALPHRYPMLLVDRVLEVSED-TIVAIKNVTINEPFFNGHFPQYPVMPGVLIME 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STRZP ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pneumoniae (strain P1031) GN=fabZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI  I++ LPHR+P LLVDRV+E +   + VAIKNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MIDIQGIKEALPHRYPMLLVDRVLEVSED-TIVAIKNVTINEPFFNGHFPQYPVMPGVLIME 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STRZJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pneumoniae (strain JJA) GN=fabZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI  I++ LPHR+P LLVDRV+E +   + VAIKNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MIDIQGIKEALPHRYPMLLVDRVLEVSED-TIVAIKNVTINEPFFNGHFPQYPVMPGVLIME 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STRR6 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=fabZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI  I++ LPHR+P LLVDRV+E +   + VAIKNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MIDIQGIKEALPHRYPMLLVDRVLEVSED-TIVAIKNVTINEPFFNGHFPQYPVMPGVLIME 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STRPZ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=fabZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            +MDI +I+  LPHR+P LLVDRV+E +     VAIKNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MMDIREIQAALPHRYPMLLVDRVLEVSDD-HIVAIKNVTINEPFFNGHFPHYPVMPGVLIME 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STRPJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI  I++ LPHR+P LLVDRV+E +   + VAIKNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MIDIQGIKEALPHRYPMLLVDRVLEVSED-TIVAIKNVTINEPFFNGHFPQYPVMPGVLIME 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STRPI ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=fabZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI  I++ LPHR+P LLVDRV+E +   + VAIKNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MIDIQGIKEALPHRYPMLLVDRVLEVSED-TIVAIKNVTINEPFFNGHFPQYPVMPGVLIME 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STRP7 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pneumoniae (strain 70585) GN=fabZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI  I++ LPHR+P LLVDRV+E +   + VAIKNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MIDIQGIKEALPHRYPMLLVDRVLEVSED-TIVAIKNVTINEPFFNGHFPQYPVMPGVLIME 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_STRP4 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=fabZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++DI  I++ LPHR+P LLVDRV+E +   + VAIKNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MIDIQGIKEALPHRYPMLLVDRVLEVSED-TIVAIKNVTINEPFFNGHFPQYPVMPGVLIME 61          
The following BLAST results are available for this feature:
BLAST of CF832674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_SYNFM4.307e-1460.66(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRZT4.307e-1459.68(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRZP4.307e-1459.68(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRZJ4.307e-1459.68(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRR64.307e-1459.68(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRPZ4.307e-1461.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRPJ4.307e-1459.68(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRPI4.307e-1459.68(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRP74.307e-1459.68(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRP44.307e-1459.68(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02D24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832674 ID=CF832674; Name=CF832674; organism=Citrus sinensis; type=EST; length=665bp
CTTTTGCCAACTCCTAATCCCATCATTGGTCTCTCCTACTAGTACCCCTA
GACTATCTCGTTAATGTCGCCGCCGACCAACTGCCATGGGTTTGATTTAA
ATGTCTATTCTTACATCTCTGCCTCATTTTATTAGCTAACATATTAATCC
TCAATTGAATCAATAGAATCCAATCTCTCAGTTCTTCTCTCTTACAATGG
CCACTACCCCTGCTGCTTCTTTTGCCAATTCACTTTTATCTCTCAATTCT
CATCGACCAAACCCAAATGCCTCCTCTATTCCAAAACCCAACACTCTCTC
CATCCAATTTGACAAGAAGAAGAATCAACAACAACAGCAGCACCAACGAC
ATGCTCGTTTCACCACATTTTGTTCTTTGGACGCTGAACCCAAAGATCCC
ATCGAAGATAAACCCATCGAACTTCGGTACCAGGCATTTCCTACAGTGAT
GGACATTAACCAGATTCGTGACATTTTGCCACACAGGTTCCCATTTCTTT
TGGTGGATAGAGTTATTGAATACAATCCAGGAGTTTCAGCTGTTGCTATT
AAGAATGTTACTATTAATGATAACTTCTTTCCTGGCCATTTTCCTGATAG
GCCAATTATGCCCGGTGTTCTCATGGTTGAGGGCAATGGCACAGGTTGGT
GGCTTGGTTATGCTG
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