CF832674

Overview
NameCF832674
Unique NameCF832674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:21..685. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFP+ P+MPGVL++E
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIE 65          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFP+ P+MPGVL++E
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIE 65          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_CLOB6 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFP+ P+MPGVL++E
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIE 65          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_CLOB1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT N+ FF GHFP+ P+MPGVL++E
Sbjct:    5 LDINEIKKIIPHRYPFLLVDKITELEEGKSAVGYKNVTANEYFFNGHFPEEPVMPGVLIIE 65          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_BACLD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            ++D  QI++I+PHR+PFLLVDRV E   G  A   KNVT+N+ FF GHFPD P+MPGVL+VE
Sbjct:    1 MLDAQQIKEIIPHRYPFLLVDRVTEVEEGKRAAGYKNVTVNEEFFNGHFPDYPVMPGVLIVE 62          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_AZOSB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Azoarcus sp. (strain BH72) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17
Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            MDIN+I   LPHR+PFLLVDRV+E       +A+KNVT+N+ FFPGHFP  P+MPGVL+VE
Sbjct:    1 MDINEIVQYLPHRYPFLLVDRVLELEENKRILALKNVTMNEPFFPGHFPHHPVMPGVLIVE 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_OCEIH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Oceanobacillus iheyensis GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.099e-17
Identity = 34/62 (54.84%), Postives = 51/62 (82.26%), Query Frame = 2
Query:  446 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            +MD+ Q+++I+PHR+PFLLVD+V+E   G    A+KNV++N+ FF GHFP+ P+MPGVL++E
Sbjct:    1 MMDVEQVKEIIPHRYPFLLVDKVVEIQEGEKVTALKNVSVNEPFFQGHFPEYPVMPGVLILE 62          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_NITMU ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.099e-17
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            MDI++I   LPHR+P LLVDRV+ + PG S  A+KNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MDIHEILKYLPHRYPLLLVDRVLAFEPGKSLTALKNVTINEPFFTGHFPHHPVMPGVLVIE 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_MYXXD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Myxococcus xanthus (strain DK 1622) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.099e-17
Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            MDI +I ++LPHR+PFLLVDRV+E  PG    A KNVTIN+ FF GHFP  P+MPGVL++E
Sbjct:    1 MDIGEILNLLPHRYPFLLVDRVVEIIPGQKLTAYKNVTINEPFFNGHFPGHPVMPGVLILE 61          
BLAST of CF832674 vs. ExPASy Swiss-Prot
Match: FABZ_HAHCH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Hahella chejuensis (strain KCTC 2396) GN=fabZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.099e-17
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  449 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVE 631
            M+IN+I++ LPHR+PFLLVDRV+E  PG     +KN+T N+  F GHFPD PIMPGVL++E
Sbjct:    1 MEINEIKEYLPHRYPFLLVDRVLEIKPGEFIAGVKNITYNEPQFTGHFPDHPIMPGVLIIE 61          
The following BLAST results are available for this feature:
BLAST of CF832674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_CLOBJ5.435e-1760.66(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOBH5.435e-1760.66(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOB65.435e-1760.66(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_CLOB15.435e-1760.66(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACLD5.435e-1761.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_AZOSB5.435e-1763.93(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_OCEIH7.099e-1754.84(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_NITMU7.099e-1762.30(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_MYXXD7.099e-1763.93(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_HAHCH7.099e-1760.66(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02D24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832674 ID=CF832674; Name=CF832674; organism=Citrus sinensis; type=EST; length=665bp
CTTTTGCCAACTCCTAATCCCATCATTGGTCTCTCCTACTAGTACCCCTA
GACTATCTCGTTAATGTCGCCGCCGACCAACTGCCATGGGTTTGATTTAA
ATGTCTATTCTTACATCTCTGCCTCATTTTATTAGCTAACATATTAATCC
TCAATTGAATCAATAGAATCCAATCTCTCAGTTCTTCTCTCTTACAATGG
CCACTACCCCTGCTGCTTCTTTTGCCAATTCACTTTTATCTCTCAATTCT
CATCGACCAAACCCAAATGCCTCCTCTATTCCAAAACCCAACACTCTCTC
CATCCAATTTGACAAGAAGAAGAATCAACAACAACAGCAGCACCAACGAC
ATGCTCGTTTCACCACATTTTGTTCTTTGGACGCTGAACCCAAAGATCCC
ATCGAAGATAAACCCATCGAACTTCGGTACCAGGCATTTCCTACAGTGAT
GGACATTAACCAGATTCGTGACATTTTGCCACACAGGTTCCCATTTCTTT
TGGTGGATAGAGTTATTGAATACAATCCAGGAGTTTCAGCTGTTGCTATT
AAGAATGTTACTATTAATGATAACTTCTTTCCTGGCCATTTTCCTGATAG
GCCAATTATGCCCGGTGTTCTCATGGTTGAGGGCAATGGCACAGGTTGGT
GGCTTGGTTATGCTG
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