CF832706

Overview
NameCF832706
Unique NameCF832706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1684 contig Csv1_Contig1684:1091..1671. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.087e-15
Identity = 52/155 (33.55%), Postives = 69/155 (44.52%), Query Frame = -2
Query:  120 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPP--PGQFKIDTAEKGGQFSLHILKPSTIVAKP 578
            D   + YL+AVIKE LRL    P++ PH +  D KL  Y +PA +++++NAW +      W               S V+  G +F  LPFG GRR  P               LV  F+   P    + K D AE  G FS+H   P   VA P
Sbjct:  335 DIQGMKYLKAVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTS-VDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKEDKTDVAESSG-FSVHREFPLYAVASP 487          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.644e-15
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = -2
Query:  282 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSP 578
            D  KL YL+ VIKETLRL    PLL+P   + D K+ GYD+P ++ +LVNAW +  NP  W+             +  ++  GN F  LPFG GR+  P
Sbjct:  350 DVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWEN--PEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICP 446          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15
Identity = 50/158 (31.65%), Postives = 73/158 (46.20%), Query Frame = -2
Query:  111 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPGQF--KIDTAEKGGQFSLHILKPSTIVAKPRSF 578
            D  +L YL+ VI ET RL    PLLVP   + + ++ GY +PA++++ VN W +  +P  WK              S ++A G +F  LPFG GRR  P               L+ +F+   P G     ID  E  G   L+  K + +V  PR +
Sbjct:  345 DIDQLHYLKMVINETWRLHPPAPLLVPREVMSEFEINGYTIPAKTRLYVNVWGIGRDPDTWK--DPEEFLPERFVNSNIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVEDIDMEESPG---LNASKKNELVLVPRKY 497          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15
Identity = 45/126 (35.71%), Postives = 60/126 (47.62%), Query Frame = -2
Query:  201 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPG 578
            D  +L YL+ VIKETLR+   +PLL+P       K+GGYD+P ++ I VN W +  NP  WK              S+++  G DF  LPFG GRR  P               L+  F+   P G
Sbjct:  341 DIERLEYLKMVIKETLRINPLVPLLIPREASKYIKIGGYDIPKKTWIYVNIWAVQRNPNVWK--DPEVFIPERFMHSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKLPEG 464          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15
Identity = 49/157 (31.21%), Postives = 78/157 (49.68%), Query Frame = -2
Query:  114 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQ--NFELLPPPGQFKIDTAEKGGQFSLHILKPSTIVAKPRS 578
            +  K+ YLQAVIKE LRLR   PLLVP +   D KL GY++PA ++++VNAW +  +   W              ++ ++  G DF+++PFG G+R  P               +V+  N+ +   P + + D  E  G   L + +   ++A P S
Sbjct:  344 EAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTW-GTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATG---LVVFRKFPLIAIPSS 496          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15
Identity = 45/155 (29.03%), Postives = 74/155 (47.74%), Query Frame = -2
Query:  114 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIDTAEKGGQFSLHILKPSTIVAKPRS 578
            +   + YL+AVIKE  R+   +PL++P +   D K+ GYD+ A +++L+NAW +  +P  W              +S ++ +G D +Y+PFG GRR  P               LV  F+    PG    D  +    F L + + + ++A P S
Sbjct:  343 EVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIW-GPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGP-NGDQPDLAEDFGLDVCRKNPLIAFPSS 495          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.133e-14
Identity = 48/154 (31.17%), Postives = 68/154 (44.16%), Query Frame = -2
Query:  117 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIDTAEKGGQFSLHILKPSTIVAKPR 578
            D   L Y++A +KE  RL    P  +PHM+  D  + GY +P  S +L++   +  NP  W K             + V+ N +D   + F  GRR                 RL+Q F  LP PG+ KID +E   +  L + KP   VA PR
Sbjct:  370 DLPNLNYVKACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKIDISE--SKNDLFMAKPLYAVATPR 521          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.133e-14
Identity = 49/138 (35.51%), Postives = 63/138 (45.65%), Query Frame = -2
Query:  171 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPGQF--KIDTAEKG 578
            D  K+P+L  VIKET RL    PLL+P   +   K+ GYD+P + +ILVNAW +  +P  W              +S V+  G  F  LPFG GRR  P               L+  F+   P G     IDT E G
Sbjct:  349 DLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLW--TDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEEAG 484          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.480e-14
Identity = 43/126 (34.13%), Postives = 62/126 (49.21%), Query Frame = -2
Query:  201 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPG 578
            D   L YL+ VIKET+RL   IPLLVP     + ++ GY +P ++K++VN W L  +P  W              +  ++  GN+F YLPFG GRR  P              +L+ +F+   P G
Sbjct:  347 DVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYW--DDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTG 470          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.525e-14
Identity = 42/126 (33.33%), Postives = 62/126 (49.21%), Query Frame = -2
Query:  201 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPG 578
            D  +L YL+ V+KET R+   +PLL+P     D K+GGYD+P ++ I VN W +  NP  WK             +++++  G +F +LPFG GRR  P               L+  F+   P G
Sbjct:  341 DIERLEYLKMVVKETFRVLPLVPLLIPREASKDVKIGGYDIPKKTWIHVNIWAIHRNPNVWK--DPEAFIPERFMDNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEG 464          
The following BLAST results are available for this feature:
BLAST of CF832706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
C71AP_ARATH5.087e-1533.55Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71B3_ARATH6.644e-1541.41Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BY_ARATH8.677e-1531.65Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH8.677e-1535.71Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH8.677e-1531.21Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH8.677e-1529.03Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C79A2_ARATH1.133e-1431.17Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C71BH_ARATH1.133e-1435.51Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH1.480e-1434.13Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BB_ARATH2.525e-1433.33Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02E18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832706 ID=CF832706; Name=CF832706; organism=Citrus sinensis; type=EST; length=582bp
TATAATAACTACCCAACGTGCCACTTTGATTTGAGTCCGACATTGGAAGA
AACCATTCAACCACTTTTGAAACAGACTTAACATTACAACCAAATGGAAT
TGTGAAACTAGAATGATCTAGGCTTGGCAACAATGGTCGAGGGCTTCAAA
ATGTGCAAACTGAACTGCCCACCTTTCTCTGCAGTGTCAATCTTAAATTG
ACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACCAAACGCCCAATAGTGA
TACCAAGAATTGGCAAAGCAAGGATAATTCCAGGGGAGGTTCTTCTCCCA
ACACCGAAAGGAAGGTAACGGAAGTCATTTCCATTAGCCTCAACCTTGGA
CTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCTTCAGGTTTCTTCCATT
GGGGGGGATTGTTGGCGAGCCACCACGCGTTCACTAGGATTTTGCTCTCA
GCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCATGAAGGTTCATGTGCGG
CACAAGAAGAGGAATTGCCATCCTAAGGCGAAGAGTTTCCTTGATCACGG
CCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGC
back to top