CF832706

Overview
NameCF832706
Unique NameCF832706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1684 contig Csv1_Contig1684:1091..1671. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.086e-12
Identity = 51/157 (32.48%), Postives = 74/157 (47.13%), Query Frame = -2
Query:  120 DTHKLPYLQAVIKETLRLRMAIPLLV-PHMNLHDAKLG-GYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXES--KVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIDTAEKGGQFSLHILKPSTIVAKP 578
            D  KLPY+QAV+KE LR+    PLL    ++  D  +G G  VPA +  +VN W + ++P  W+             E   +V+  GND R  PFG GRR  P              +L+ +FE L P  +  +D +E        +LK S  +A+P
Sbjct:  390 DIPKLPYIQAVVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWL-PHAEHPVDLSE--------VLKLSCEMARP 537          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.086e-12
Identity = 39/126 (30.95%), Postives = 59/126 (46.83%), Query Frame = -2
Query:  201 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPG 578
            D  +L YL+ VIKET RL    PLL+P   + +  + GY +P ++++ VN W +  +P  WK             ++ ++A G  F  LPFG GRR  P               L+ +F+   P G
Sbjct:  344 DMDQLEYLKMVIKETWRLHPTTPLLLPREAMSEFDINGYTIPVKTRLHVNVWAIGRDPDTWK--DPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEG 467          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.086e-12
Identity = 45/138 (32.61%), Postives = 67/138 (48.55%), Query Frame = -2
Query:  171 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPGQF--KIDTAEKG 578
            D ++L Y + VIKET RL  A PLL+P   +   K+ GYD+P +++I+VN + +  +P  W+             +S V+  G +F  LPFG GRR  P               L+  F+   P G+    ID  E+G
Sbjct:  348 DLNQLNYFKLVIKETFRLHPAAPLLLPREAMAKIKIQGYDIPEKTQIMVNVYAIGRDPDLWEN--PEEFKPERFVDSSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGLPEGRTVKDIDLEEEG 483          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.086e-12
Identity = 39/99 (39.39%), Postives = 51/99 (51.52%), Query Frame = -2
Query:  282 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSP 578
            D   L Y++ VIKET RL    P+L+P   + + K+ GYD+   ++I VNAW +  NP  WK             +S VE  G  F  LPFG GRR  P
Sbjct:  351 DLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWK--DPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCP 447          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.086e-12
Identity = 43/127 (33.86%), Postives = 58/127 (45.67%), Query Frame = -2
Query:  201 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAK-LGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPG 578
            D   + YL+AVIKE+LRL     LLVP  ++ D K LG Y +PA ++ L+N W +  +P  W+              + ++  G  F  LPFG GRR  P              RLV  F    P G
Sbjct:  352 DLKNMQYLRAVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWEN--PEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKG 476          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.030e-12
Identity = 37/131 (28.24%), Postives = 64/131 (48.85%), Query Frame = -2
Query:  186 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPGQFKID 578
            +  +L Y+++V+KETLRL    PL +P  +  + ++ G+ +PA ++IL+NAW +  +P  W+                 +  GNDF ++PFG G+R  P              +L+ +F+   P G    D
Sbjct:  340 EMQELKYMRSVVKETLRLHPPFPL-IPRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSR--DFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDAD 467          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.264e-12
Identity = 33/99 (33.33%), Postives = 54/99 (54.55%), Query Frame = -2
Query:  282 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSP 578
            D  +L Y+++V+KET+R+   IPL +P     +  + GY +P +++I++N W +  NP  W+K                +  GNDF ++PFG GRR  P
Sbjct:  343 DVQELKYMKSVVKETMRMHPPIPL-IPRSCREECVVNGYTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSK--DFMGNDFEFVPFGAGRRICP 438          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: CP17A_ICTPU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.875e-12
Identity = 50/162 (30.86%), Postives = 74/162 (45.68%), Query Frame = -2
Query:  114 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGN-----DFRYLPFGVGRRTSPXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIDTAEKGGQFSLHILKPS--TIVAKPRS 578
            D   LPYL+A I+E LR+R   PLL+PH+ L DA +G Y V   ++++VN W L ++  +WK                +   GN        YLPFG G R                  ++Q F L  P GQ      E  G+F + +L+P    ++A+ R+
Sbjct:  349 DRGNLPYLEATIREVLRIRPVSPLLIPHVALSDANIGEYTVQKGTRVIVNLWSLHHDEKEWKNPELFNPERF------LNEEGNSLCCPSLSYLPFGAGVRVCLGEALAKLELFLFLSWILQRFTLEVPGGQ---PLPELQGKFRV-VLQPQKYKVIARLRT 500          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.875e-12
Identity = 35/99 (35.35%), Postives = 53/99 (53.54%), Query Frame = -2
Query:  282 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSP 578
            D   L Y + V+KE  RL  A+P L+P   L   K+ GYD+PA+++I++N + +A +P  W              +S ++  G +F  LPFG GRR  P
Sbjct:  345 DLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTN--PDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICP 441          
BLAST of CF832706 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.979e-12
Identity = 32/99 (32.32%), Postives = 55/99 (55.56%), Query Frame = -2
Query:  282 DTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPPQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRTSP 578
            D  +L Y+++V+KET+R+   IPL +P     + ++ GY +P +++I++N W +  NP  W+K                +  G+DF ++PFG GRR  P
Sbjct:  342 DVQELKYMKSVVKETMRMHPPIPL-IPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSR--DFMGSDFEFIPFGAGRRICP 437          
The following BLAST results are available for this feature:
BLAST of CF832706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
C78A4_PINRA3.086e-1232.48Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71BW_ARATH3.086e-1230.95Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH3.086e-1232.61Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH3.086e-1239.39Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71A4_SOLME3.086e-1233.86Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C7D94_MENGR4.030e-1228.24Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71DF_MENPI5.264e-1233.33Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
CP17A_ICTPU6.875e-1230.86Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalu... [more]
C71BT_ARATH6.875e-1235.35Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENSP8.979e-1232.32Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832706 ID=CF832706; Name=CF832706; organism=Citrus sinensis; type=EST; length=582bp
TATAATAACTACCCAACGTGCCACTTTGATTTGAGTCCGACATTGGAAGA
AACCATTCAACCACTTTTGAAACAGACTTAACATTACAACCAAATGGAAT
TGTGAAACTAGAATGATCTAGGCTTGGCAACAATGGTCGAGGGCTTCAAA
ATGTGCAAACTGAACTGCCCACCTTTCTCTGCAGTGTCAATCTTAAATTG
ACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACCAAACGCCCAATAGTGA
TACCAAGAATTGGCAAAGCAAGGATAATTCCAGGGGAGGTTCTTCTCCCA
ACACCGAAAGGAAGGTAACGGAAGTCATTTCCATTAGCCTCAACCTTGGA
CTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCTTCAGGTTTCTTCCATT
GGGGGGGATTGTTGGCGAGCCACCACGCGTTCACTAGGATTTTGCTCTCA
GCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCATGAAGGTTCATGTGCGG
CACAAGAAGAGGAATTGCCATCCTAAGGCGAAGAGTTTCCTTGATCACGG
CCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGC
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