CF832707

Overview
NameCF832707
Unique NameCF832707
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF832707_ssr217 microsatellite CF832707_ssr217:217..228. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1541 contig Csv1_Contig1541:31..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.032e-96
Identity = 176/219 (80.37%), Postives = 190/219 (86.76%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F AV++A  +SKLRGK+              NWLQVGDDLNHRNL D AKK+GD+ LLRMGQRNLVVVSSPD  KEVL TQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ+R  WE EAA VVEDVKK+P++AT GIVLR+RLQLMMYNNM+RIMFDRRFES+DDPLF RLKALNGER+RLAQSFEYNYGDFIPILR
Sbjct:   14 FVAVILATVISKLRGKKLKLPPGPIPIPIFGNWLQVGDDLNHRNLVDYAKKFGDLFLLRMGQRNLVVVSSPDLTKEVLLTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNREGWEFEAASVVEDVKKNPDSATKGIVLRKRLQLMMYNNMFRIMFDRRFESEDDPLFLRLKALNGERSRLAQSFEYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 349.362 bits (895), Expect = 1.141e-95
Identity = 171/219 (78.08%), Postives = 191/219 (87.21%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F A + AIT+SKLRGK               NWLQVGDDLNHRNL+DLAK++ ++LLLRM QRNLVV+SSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQD+VFTVYGEHWRKMRRIMTVPFFTNKVVQQ+RF WE EAA VV+DVKK+ +A+ NGIV+RRRLQLMMYN MYRIMFDRRFES++DPLF +LKALNGER+RLAQSFEYNYGDFIPILR
Sbjct:   14 FLAAITAITISKLRGKPFKLPPGPFPVPVFGNWLQVGDDLNHRNLTDLAKRFAEILLLRMEQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDIVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVKKNSKASVNGIVIRRRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 3.106e-93
Identity = 167/219 (76.26%), Postives = 186/219 (84.93%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F A  +A+T+SKLRGKR               WLQVGDDLNHRNL+D AK++G++ LLRMGQRNLVVVSSP+ AKEVLHTQ VEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ+R+ WE EA  VV DVK + EA+  GIV+R+RLQLMMYN MYRIMFDRRFES++DPLF +LKALNGER+RLAQSFEYNYGDFIPILR
Sbjct:   14 FIAATIAVTISKLRGKRFKLPPGPIPVPIFGYWLQVGDDLNHRNLTDYAKRFGEIFLLRMGQRNLVVVSSPELAKEVLHTQCVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWESEAESVVNDVKNNAEASVGGIVIRKRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 340.887 bits (873), Expect = 4.057e-93
Identity = 172/219 (78.54%), Postives = 189/219 (86.30%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F A  +AIT+SKLRGKR              NWLQVGDDLNHRNL+DLAK++GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYG    +MRRIMTVPFFTNKVVQQ+RF WE EA  VV+DVKK+PEA ++GIVLRRRLQLMMYN MYRIMFDRRFES++DPLF +LKALNGER+RLAQSFEYNYGDFIPILR
Sbjct:   14 FIAATIAITISKLRGKRFKLPPGPIPVPVFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGT-LAEMRRIMTVPFFTNKVVQQYRFGWEFEAQSVVDDVKKNPEACSSGIVLRRRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILR 231          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18
Identity = 55/177 (31.07%), Postives = 91/177 (51.41%), Query Frame = 3
Query:  177 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPIL 707
            HR L +LA+KYG +L LR G    VVVSS + AK  L T  + F SR    V   F    +D+ F+ YG+HWRKMR+I  +   T+K ++  +   ++E + ++  + ++ E+    + + + +   + N ++RI+  ++F   D     +  A       +A     N GDFIP L
Sbjct:   63 HRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARKKFSDNDLGADGKGFADLVVEVSIAVG-SLNIGDFIPYL 238          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18
Identity = 51/177 (28.81%), Postives = 99/177 (55.93%), Query Frame = 3
Query:  177 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPIL 707
            HR+L  L+KKYG V+LL +G + ++V SS +  ++++ T  + + +R ++ + D      +D+ F+ +GE+WR++R I  +   +NK VQ +R   E+E + ++E +K+   ++++   LR     + YN + R+   +++  + D      KA   +   L  +F  N GD+IP L
Sbjct:   46 HRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALGKKYNDEID-----AKATLDKFVELLGTF--NVGDYIPCL 215          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17
Identity = 61/201 (30.35%), Postives = 100/201 (49.75%), Query Frame = 3
Query:   66 VVAITV----SKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD--PLFNRLKALNGE 650
            ++ IT+     + RGK+              N  Q+G    HR+L  L+ +YG ++LL  G   ++VVSS D AK+VL T    F SR R+ +FD     G+D+    YGE+WR+M+ +  +  F+NK+V+  R   ++E + ++E ++       N   L   L  +  N + R+   R++  + D   L  RL  L GE
Sbjct:   14 IILITILFFKKQSRGKKSNAPPSPPRLPLIRNLHQLGRH-PHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKIRISSSLRIN---LSEILVNLTNNVICRVALGRKYGGKTDFKDLMKRLTRLLGE 210          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 47/146 (32.19%), Postives = 83/146 (56.85%), Query Frame = 3
Query:  177 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 614
            HR L DLAKKYG ++ L++G+   ++VSS ++AKEV+ T  V F SR R++  DI      D+ F+ YG++WR++R+I  V   + K VQ      E+E   +++ +  +  +  N   L + +  +++    R  F +R+  Q++
Sbjct:   41 HRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVN---LSQAIDSLIFTITSRSAFGKRYMEQEE 183          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 55/198 (27.78%), Postives = 99/198 (50.00%), Query Frame = 3
Query:   63 VVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD--PLFNRLKALNGE 650
            + +   + + +GK+              N  Q+G    HR+L  L+ +YG ++LLR G   ++VVSS D A+++L T    F SR R+ +F+    + +D+    YGE+WR+M+ +  +   TNK+V+  R   ++E + ++E ++K      N   L   L  +  + + R+   R++  + D   L  RL  L GE
Sbjct:   16 ITILFFIKQKKGKKSNTPASPPRLPLIGNLHQLGRH-PHRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKSSSLQVN---LSELLGSLTNDVISRVALGRKYSDETDFKELMKRLTKLLGE 209          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 60/222 (27.03%), Postives = 111/222 (50.00%), Query Frame = 3
Query:   60 AVVVAITV----SKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD--PLFNRLKALNGERNRLAQSFEYNYGDFIPIL 707
            ++++ IT+     + RGK+              N  Q+G    HR+L  L+ +YG ++LL +G+  ++VVSS D A+++L T    F SR R+ +F+     G+D+ F  YGE+WR+++ +  +   +NK+V   R   ++E + ++E ++K      N   +   L  +  + + RI   R++  + D   L  RL  L G         E++ G ++P L
Sbjct:   11 SLIIFITILFFKKQKRGKKSNTPRSPPRLPLIGNLHQLGHH-PHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKSSSLQVN---VSELLGSLTNDVISRIALGRKYSGETDSKELMKRLMMLMG---------EFSVGTYVPWL 219          
The following BLAST results are available for this feature:
BLAST of CF832707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
TCMO_ARATH1.032e-9680.37Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
TCMO_PEA1.141e-9578.08Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_MEDSA3.106e-9376.26Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
TCMO_CICAR4.057e-9378.54Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C75A1_PINTA3.282e-1831.07Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71A3_SOLME7.312e-1828.81Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71AO_ARATH2.127e-1730.35Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71DB_LOTJA1.056e-1632.19Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71AM_ARATH1.056e-1627.78Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH1.056e-1627.03Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832707 ID=CF832707; Name=CF832707; organism=Citrus sinensis; type=EST; length=710bp
CGTTAATCGTACCTATGGATCTCCTCTTGCTGGAAAAGACGCTTTTAGCC
CTCTTCTCCGCCGTTGTTGTCGCCATTACCGTCTCTAAACTCCGCGGAAA
GCGCTTCAAGCTCCCCCCCGGCCCCCTCCCCGTCCCCGTATTCGGCAACT
GGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGACTTAGCC
AAGAAATATGGAGATGTCCTCCTCCTCCGCATGGGCCAGCGCAACCTCGT
CGTCGTCTCGTCGCCGGACCACGCCAAGGAGGTTCTGCACACGCAGGGAG
TGGAGTTCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTCACTGGG
AAGGGCCAGGACATGGTGTTCACAGTGTACGGCGAGCACTGGCGGAAGAT
GCGGAGGATCATGACCGTCCCTTTCTTCACGAACAAAGTGGTTCAGCAAC
ATCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTCGTTGAGGATGTTAAG
AAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCGGCTGCA
GCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCG
AGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAATGGGGAG
AGGAATCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTTTATTCC
CATTTTGAGA
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