CF832708

Overview
NameCF832708
Unique NameCF832708
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_CLONN (S-adenosylmethionine synthetase OS=Clostridium novyi (strain NT) GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.146e-48
Identity = 100/202 (49.50%), Postives = 132/202 (65.35%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   MV GEI+T   V   K+VR+    IG+     G DA+ C VL +I++QS DIA GV      R       E IGAGDQG MFG+AT+ET E+MPL   +A KL  +L EVRKN T ++LRPDGKTQVTVEY ++     PVR+  V++STQHD  VT ++I  D+ EHVIK V+P ++LD++T +++NP
Sbjct:   38 RVACETAVTTGMVMVMGEISTNCYVDIPKVVREVISDIGYTRAKYGFDAETCSVLTSIDEQSQDIAMGVDEALESRQGQKDDVEAIGAGDQGIMFGFATNETKEYMPLPINMAHKLSRKLAEVRKNGTLAYLRPDGKTQVTVEYEDNK----PVRIDAVVVSTQHDPEVTQEQIQKDIMEHVIKTVVPNEWLDDETKYYINP 235          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_BACWK (S-adenosylmethionine synthetase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.146e-48
Identity = 110/204 (53.92%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V   KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T S+LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP
Sbjct:   41 RVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINP 241          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_BACCR (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.146e-48
Identity = 110/204 (53.92%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V   KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T S+LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP
Sbjct:   41 RVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINP 241          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_BACC4 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain B4264) GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.146e-48
Identity = 110/204 (53.92%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V   KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T S+LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP
Sbjct:   41 RVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINP 241          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_BACC2 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain G9842) GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.146e-48
Identity = 110/204 (53.92%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V   KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T S+LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP
Sbjct:   41 RVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINP 241          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_BACC1 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 10987) GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.146e-48
Identity = 110/204 (53.92%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V   KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T S+LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP
Sbjct:   41 RVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINP 241          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_CLOTH (S-adenosylmethionine synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.803e-48
Identity = 109/204 (53.43%), Postives = 128/204 (62.75%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V   KIVR T R IG+     G D D C VL +I++QSPDIA GV+     +         E IGAGDQG MFG+A DET E MP+   LA KL  RL++VRKN T ++LRPDGK+QVTVEY  D     PVRV TVLISTQH   V  D I  D+ EHVIKPVIP + LD KT + +NP
Sbjct:   39 RVACETAVTTGLVLVTGEITTNCYVDIPKIVRSTIREIGYDRAKYGFDCDTCAVLTSIDEQSPDIAMGVNKALEAKTGEMSDEEIEAIGAGDQGMMFGFACDETPELMPMPISLAHKLAMRLSQVRKNGTLNYLRPDGKSQVTVEYDGDK----PVRVDTVLISTQHGPEVDYDTIKRDVIEHVIKPVIPAELLDSKTKYLVNP 238          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.803e-48
Identity = 104/202 (51.49%), Postives = 134/202 (66.34%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-----ED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V   KIVR+T  +IG+     G D+D C VL +I +QSPDIA GV      +      ED IGAGDQG MFGYA +ETSE+MP++  +A KL  RL+EVRKN T  +LRPDGKTQVTVE Y DN A   +R+ T+++STQH   VT ++I  D+ EHVI  V+P ++LDE T +++NP
Sbjct:   38 RVACETSVTTGMVLVTGEITTNCYVDIPKIVRNTIEAIGYTRAKYGFDSDTCAVLTSISEQSPDIAMGVDESLESKQGGMDKEDVIGAGDQGMMFGYANNETSEYMPMAISIAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVE-YEDNKA---IRIDTIVVSTQHGPEVTREQIEKDIFEHVISKVVPVEFLDENTNYYINP 235          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_BACCN (S-adenosylmethionine synthetase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.803e-48
Identity = 108/204 (52.94%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V   KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T  +LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   +T ++I  DLKEHVIK V+P + +DE+T F +NP
Sbjct:   41 RVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDRALEAREGQMTDAEIEAIGAGDQGLMFGFACNETKELMPLPISLAHKLARRLTEVRKDETLEYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPEITWEQIDRDLKEHVIKAVVPAELMDEETKFFINP 241          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_CLOBA (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.781e-48
Identity = 101/202 (50.00%), Postives = 129/202 (63.86%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCT T   MV GEI+T   V   K+VR+T R IG+     G D D C V+  I++QS DIA GV      +       E +GAGDQG MFG+AT+ET  +MPL   +A KL  RLTEVRK+ T  +LRPDGKTQVTVEY N+     P R+ T++ISTQH E V+ + I  D+KEHVI  V+P + LD +T + +NP
Sbjct:   38 RVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYENNK----PKRIDTIVISTQHGEEVSLETIEKDIKEHVINAVVPAELLDAETRYFINP 235          
The following BLAST results are available for this feature:
BLAST of CF832708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLONN2.146e-4849.50S-adenosylmethionine synthetase OS=Clostridium nov... [more]
METK_BACWK2.146e-4853.92S-adenosylmethionine synthetase OS=Bacillus weihen... [more]
METK_BACCR2.146e-4853.92S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC42.146e-4853.92S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC22.146e-4853.92S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC12.146e-4853.92S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_CLOTH2.803e-4853.43S-adenosylmethionine synthetase OS=Clostridium the... [more]
METK_CLOTE2.803e-4851.49S-adenosylmethionine synthetase OS=Clostridium tet... [more]
METK_BACCN2.803e-4852.94S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_CLOBA4.781e-4850.00S-adenosylmethionine synthetase OS=Clostridium bot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832708 ID=CF832708; Name=CF832708; organism=Citrus sinensis; type=EST; length=595bp
GAGAGCAGGTTGCCTGTGAGACATGCACCAAGACCAACCCCTTCATGGTC
TTTGGAGAGATTACCACCAAGGCCAAGGTACACTATGAGAAGATTGTTCG
CGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACG
CCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATT
GCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGC
TGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAAT
TTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACG
GAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGAC
CCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGTCCCAGTCC
GTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAAT
GATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCC
CGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATC
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