CF832708

Overview
NameCF832708
Unique NameCF832708
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.781e-48
Identity = 104/204 (50.98%), Postives = 131/204 (64.22%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V    +VR T + IG+     G DA+ C VL +I++QS DIAQGV      R         E IGAGDQG MFG+AT+ET E MPL   L+ KL  RLTEVRKN T  +LRPDGKTQVT+EY  ++    PVRV T+++STQH   VT ++I ADLKEHVI+ V+P   +DE+T + +NP
Sbjct:   43 RVACETSVTTGLVLVAGEITTNTYVDIPSVVRQTIKGIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGQMTDAEIEAIGAGDQGLMFGFATNETEELMPLPISLSHKLSRRLTEVRKNGTLGYLRPDGKTQVTIEYDEND---TPVRVDTIVLSTQHAPEVTLEQIQADLKEHVIEAVVPSALIDEETKYFINP 243          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.244e-48
Identity = 103/204 (50.49%), Postives = 128/204 (62.75%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT+  V   K+VR     IG+     G DAD C V+ +I++QSPDIA GV      +         E IGAGDQG MFG+A DET E MP+  +LA KL  RL EVRKN T S+LRPDGKTQVTVEY +D     PVRV +V++S QH   + +D I  D+ EHVIKP+IPE  +D+KT   +NP
Sbjct:   38 RVACETAVTTGLVLVMGEITTQCYVDIPKVVRKVVEEIGYTRAKFGFDADTCAVITSIDEQSPDIALGVDKALEAKRGELSDSEIEAIGAGDQGLMFGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEDDK----PVRVDSVVVSAQHAPEIDHDTIERDIIEHVIKPIIPENMIDDKTKIFVNP 237          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.244e-48
Identity = 102/201 (50.75%), Postives = 132/201 (65.67%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDI--GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET  KT   M+ GEITTKAK+ Y+KI RDT R IG+ S D+G DAD C V+ +I +QSPDI  GV    G F     ++  GAGDQG MFGYA +ET  FMPL+  LA +L  RLT+VRK+    +LRPDGK+QVTVEY +   A    R+  V+ISTQH   V + +I AD+K++VI  + P   LD  T +++NP
Sbjct:   42 RVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFMPLTIHLAHRLAERLTKVRKDKVVDYLRPDGKSQVTVEYKDGKAA----RIEAVVISTQHAAGVDHKQIEADIKKYVINEICPANMLDSNTKYYINP 238          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.155e-48
Identity = 108/204 (52.94%), Postives = 127/204 (62.25%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFTKRP-EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACE    T   +V GEITTK  V   KI RDT R IG+     G DAD C V+ +I++QSPDIA GV        G  T+   E IGAGDQG MFG+A DET   MP+   LA KL  RL  VRK     +LRPDGKTQVTVEY +D     PVRV TV++STQH   VT+ +I AD+ EHVIKPVIPE  LD+ T   +NP
Sbjct:   38 RVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTEDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKEGILPYLRPDGKTQVTVEYEDDK----PVRVDTVVVSTQHSPEVTHAQIEADVIEHVIKPVIPEGMLDKNTKIFINP 237          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.065e-47
Identity = 104/204 (50.98%), Postives = 130/204 (63.73%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFTKRP-EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V   +IVRDT R IG+     G DAD C VL +I++QSPDIA GV        G  T    E IGAGDQG MFG+A +ET E MP+   LA +L  RL EVRK     +LRPDGKTQVT+E Y++NG   PVRV T+++S QH   +T ++I  D+KE VIKPV+P + LDE T + +NP
Sbjct:   41 RVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDRALEAREGQMTDEEIEAIGAGDQGLMFGFACNETEELMPMPISLAHRLARRLAEVRKTDVLPYLRPDGKTQVTIE-YDENGK--PVRVDTIVVSAQHHPEITQEQIQRDIKEQVIKPVVPAELLDENTKYFINP 241          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.065e-47
Identity = 100/202 (49.50%), Postives = 130/202 (64.36%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCT T   MV GEI+T   V   K+VR+T R IG+     G D D C V+  I++QS DIA GV      +       E +GAGDQG MFG+AT+ET  +MPL   +A KL  RLTEVRK+ T  +LRPDGKTQVTVEY N+     P R+ T++ISTQH E V+ ++I  D+KE+VI  V+P + LD +T + +NP
Sbjct:   38 RVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYENNK----PKRIDTIVISTQHGEEVSLEKIEKDIKEYVINAVVPTELLDSETRYFINP 235          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.391e-47
Identity = 105/204 (51.47%), Postives = 127/204 (62.25%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFTKRP-EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACE    T   +V GEITTK  V   KI RDT R IG+     G DAD C V+ +I++QSPDIA GV        G  T    E IGAGDQG MFG+A DET   MP+   LA KL  RL  VRK     +LRPDGKTQVTVEY +D     P+RV T+++STQH   VT+ +I AD+ EHVIKP+IPE  LD+ T  ++NP
Sbjct:   38 RVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTDDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKGGILPYLRPDGKTQVTVEYEDDR----PIRVDTIVVSTQHSPEVTHAQIEADVIEHVIKPIIPEGMLDKNTKIYINP 237          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_BACHD (S-adenosylmethionine synthetase OS=Bacillus halodurans GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.391e-47
Identity = 102/204 (50.00%), Postives = 134/204 (65.69%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEITT   V   K+VRDT R+IG+     G D++ C VL +I++QSPDIAQGV+     R         E IGAGDQG MFGYA +ET E MPL   L+ KL  RL+E RK     +LRPDGKTQVTVEY  ++ +   VR+ T++ISTQH   VT ++I +DLK+HVI+ V+PE+ +DE+T + +NP
Sbjct:   43 RVACETSVTTGLVLVAGEITTSTYVDIPKVVRDTIRNIGYTRAKYGFDSETCAVLTSIDEQSPDIAQGVNQALEAREGQMTDAEIEAIGAGDQGLMFGYANNETPELMPLPISLSHKLARRLSEARKGEILPYLRPDGKTQVTVEYDENDQS---VRIDTIVISTQHHPEVTLEQIESDLKQHVIRSVVPEELIDEETKYFINP 243          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_CLOD6 (S-adenosylmethionine synthetase OS=Clostridium difficile (strain 630) GN=metK PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.817e-47
Identity = 109/204 (53.43%), Postives = 130/204 (63.73%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-HGHFTKRPEDI-------GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   +V GEI+T A V   K+VR+T R IG+     G D D C V+ +I++QS DIA GV  G  +K  E+I       GAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK     +LRPDGKTQVTVEY         VRVHTVLIS QH ETV+ND+I  DL  HVIK VIP + LDE+T  ++NP
Sbjct:   39 RVACETTVTTGLVLVAGEISTSAYVDIPKLVRETVREIGYTRAKYGFDCDTCAVITSIDEQSGDIAMGVDEGLESKTGEEIEEEIEKVGAGDQGIMFGFACNETPELMPLPISLAHKLSRRLTEVRKTGLVDYLRPDGKTQVTVEYEGSKA----VRVHTVLISAQHCETVSNDKIREDLINHVIKEVIPAELLDEETKIYINP 238          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_CLOBL (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=metK PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.903e-47
Identity = 99/202 (49.01%), Postives = 129/202 (63.86%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTK------RPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   MV GEI+TK  V   K+VR+T R IG+     G D + C V+ +I++QS DIA GV            R + +GAGDQG MFG+AT+ET E+MP+   +A KL  RL+EVRKN T  +LRPDGKTQVTVEY N      PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T + +NP
Sbjct:   38 RVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDRLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYENGK----PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINP 235          
The following BLAST results are available for this feature:
BLAST of CF832708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BACSK4.781e-4850.98S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_THEP36.244e-4850.49S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_BRAHW6.244e-4850.75S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_ANATD8.155e-4852.94S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_GEOKA1.065e-4750.98S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_CLOBB1.065e-4749.50S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CALS81.391e-4751.47S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_BACHD1.391e-4750.00S-adenosylmethionine synthetase OS=Bacillus halodu... [more]
METK_CLOD61.817e-4753.43S-adenosylmethionine synthetase OS=Clostridium dif... [more]
METK_CLOBL6.903e-4749.01S-adenosylmethionine synthetase OS=Clostridium bot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832708 ID=CF832708; Name=CF832708; organism=Citrus sinensis; type=EST; length=595bp
GAGAGCAGGTTGCCTGTGAGACATGCACCAAGACCAACCCCTTCATGGTC
TTTGGAGAGATTACCACCAAGGCCAAGGTACACTATGAGAAGATTGTTCG
CGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACG
CCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATT
GCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGC
TGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAAT
TTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACG
GAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGAC
CCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGTCCCAGTCC
GTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAAT
GATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCC
CGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATC
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