CF832708

Overview
NameCF832708
Unique NameCF832708
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_STAAN (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain N315) GN=metK PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.947e-45
Identity = 96/204 (47.06%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   ++ GEI+T   V   K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP
Sbjct:   41 RVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINP 240          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_STAAM (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=metK PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.947e-45
Identity = 96/204 (47.06%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   ++ GEI+T   V   K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP
Sbjct:   41 RVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINP 240          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_STAA9 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH9) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.947e-45
Identity = 96/204 (47.06%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   ++ GEI+T   V   K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP
Sbjct:   41 RVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINP 240          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_STAA2 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH1) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.947e-45
Identity = 96/204 (47.06%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   ++ GEI+T   V   K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP
Sbjct:   41 RVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINP 240          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_STAA1 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.947e-45
Identity = 96/204 (47.06%), Postives = 133/204 (65.20%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACET   T   ++ GEI+T   V   K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP
Sbjct:   41 RVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINP 240          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_STRP7 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain 70585) GN=metK PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.439e-45
Identity = 105/203 (51.72%), Postives = 131/203 (64.53%), Query Frame = 3
Query:    9 VACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            VA ET   T    VFGEI+T A V   ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+   S+LRPD K+QVTVEY  ND     PVRV TV+ISTQHD  VTN++I  D+ + VIK VIP  YLD+KT F +NP
Sbjct:   41 VAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEYDENDR----PVRVDTVVISTQHDPEVTNEQIHQDVIDKVIKEVIPSSYLDDKTKFFINP 239          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_THESQ (S-adenosylmethionine synthetase OS=Thermotoga sp. (strain RQ2) GN=metK PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.102e-44
Identity = 101/204 (49.51%), Postives = 124/204 (60.78%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VA ET   T   ++ GE+TT+A V    I R T   IG+     G D + C VL +I  QSPDIA GV      +         E +GAGDQG MFGYAT+ET E+MPL   LA KL  RL EVRKN T  +LRPDGKTQVT+EY +D     PVRV TVLISTQHD  ++  ++   + EHVI PVIPE+Y D+K    +NP
Sbjct:   38 RVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEQYRDDKMKILVNP 237          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_THEP1 (S-adenosylmethionine synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metK PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.102e-44
Identity = 101/204 (49.51%), Postives = 124/204 (60.78%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VA ET   T   ++ GE+TT+A V    I R T   IG+     G D + C VL +I  QSPDIA GV      +         E +GAGDQG MFGYAT+ET E+MPL   LA KL  RL EVRKN T  +LRPDGKTQVT+EY +D     PVRV TVLISTQHD  ++  ++   + EHVI PVIPE+Y D+K    +NP
Sbjct:   38 RVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEQYRDDKMKILVNP 237          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_THEMA (S-adenosylmethionine synthetase OS=Thermotoga maritima GN=metK PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.102e-44
Identity = 101/204 (49.51%), Postives = 124/204 (60.78%), Query Frame = 3
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VA ET   T   ++ GE+TT+A V    I R T   IG+     G D + C VL +I  QSPDIA GV      +         E +GAGDQG MFGYAT+ET E+MPL   LA KL  RL EVRKN T  +LRPDGKTQVT+EY +D     PVRV TVLISTQHD  ++  ++   + EHVI PVIPE+Y D+K    +NP
Sbjct:   38 RVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEQYRDDKMKILVNP 237          
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_STRGC (S-adenosylmethionine synthetase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metK PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.102e-44
Identity = 106/203 (52.22%), Postives = 132/203 (65.02%), Query Frame = 3
Query:    9 VACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            VA ET   T    VFGEI+T A V   ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+   S+LRPD K+QVTVEY  ND+    PVRV TV+ISTQHD   TN+EI  D+ E VIK VIP +YLD+KT F +NP
Sbjct:   41 VAAETAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRLAELRKSGEISYLRPDAKSQVTVEYDENDH----PVRVDTVVISTQHDPEATNEEIHRDVIEKVIKAVIPAQYLDDKTKFFINP 239          
The following BLAST results are available for this feature:
BLAST of CF832708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAAN4.947e-4547.06S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAM4.947e-4547.06S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA94.947e-4547.06S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA24.947e-4547.06S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA14.947e-4547.06S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STRP78.439e-4551.72S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_THESQ1.102e-4449.51S-adenosylmethionine synthetase OS=Thermotoga sp. ... [more]
METK_THEP11.102e-4449.51S-adenosylmethionine synthetase OS=Thermotoga petr... [more]
METK_THEMA1.102e-4449.51S-adenosylmethionine synthetase OS=Thermotoga mari... [more]
METK_STRGC1.102e-4452.22S-adenosylmethionine synthetase OS=Streptococcus g... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832708 ID=CF832708; Name=CF832708; organism=Citrus sinensis; type=EST; length=595bp
GAGAGCAGGTTGCCTGTGAGACATGCACCAAGACCAACCCCTTCATGGTC
TTTGGAGAGATTACCACCAAGGCCAAGGTACACTATGAGAAGATTGTTCG
CGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACG
CCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATT
GCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGC
TGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAAT
TTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACG
GAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGAC
CCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGTCCCAGTCC
GTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAAT
GATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCC
CGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATC
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