CF832708

Overview
NameCF832708
Unique NameCF832708
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:357..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 3.371e-102
Identity = 177/196 (90.31%), Postives = 186/196 (94.90%), Query Frame = 3 
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETC+KTN  M+FGEITTKA V YEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY ND GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPV+PE+YLDEKTIFHLNP
Sbjct:   42 KVACETCSKTNMVMIFGEITTKANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRNDGGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEQYLDEKTIFHLNP 237
[Close]
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 3.371e-102
Identity = 180/196 (91.84%), Postives = 185/196 (94.39%), Query Frame = 3 
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCTKTN  MVFGEITTKA V YEKIVRDTCR+IGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQG MFGYATDET E MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY N+ GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:   41 KVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 236
[Close]
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 4.403e-102
Identity = 177/196 (90.31%), Postives = 186/196 (94.90%), Query Frame = 3 
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCTKTN  MVFGEITTKA + YEKIVRDTCRSIGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPED+GAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTN++IAADLKEHVIKPVIPEKYLD+KTIFHLNP
Sbjct:   39 KVACETCTKTNMVMVFGEITTKANIDYEKIVRDTCRSIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPEKYLDDKTIFHLNP 234
[Close]
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 5.750e-102
Identity = 178/196 (90.82%), Postives = 186/196 (94.90%), Query Frame = 3 
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCTKTN  MVFGEITTKA V YEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQS DIAQGVHGHF+KRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:   40 KVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSSDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 235
[Close]
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 7.510e-102
Identity = 175/196 (89.29%), Postives = 186/196 (94.90%), Query Frame = 3 
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCTKTN  MVFGEITTK  + YEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRK+ TC WLRPDGKTQVT+EYYN+NGAMVP+RVHTVLISTQHDETVTND+IAADLKEHVI+PVIPEKYLDEKTIFHLNP
Sbjct:    6 KVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTIEYYNENGAMVPIRVHTVLISTQHDETVTNDKIAADLKEHVIRPVIPEKYLDEKTIFHLNP 201
[Close]
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 7.510e-102
Identity = 179/196 (91.33%), Postives = 183/196 (93.37%), Query Frame = 3 
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCTKTN  MVFGEITTKA V YEKIVR TCRSIGFVSDDVGLDAD C VLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:   39 KVACETCTKTNMVMVFGEITTKANVDYEKIVRSTCRSIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYLNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 234
[Close]
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 9.808e-102
Identity = 178/196 (90.82%), Postives = 184/196 (93.88%), Query Frame = 3 
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCTKTN  MVFGEITTKA V YEKIVR TCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH T+RPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:   43 KVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 238
[Close]
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.281e-101
Identity = 178/196 (90.82%), Postives = 186/196 (94.90%), Query Frame = 3 
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCTKTN  MVFGEITTKA V YEKIVR+TCR+IGFVS DVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY N++GA VPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE+YLDEKTIFHLNP
Sbjct:   42 KVACETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNP 237
[Close]
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 368.622 bits (945), Expect = 1.281e-101
Identity = 178/196 (90.82%), Postives = 186/196 (94.90%), Query Frame = 3 
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCTKTN  MVFGEITTKA V YEKIVR+TCR+IGFVS DVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY N++GA VPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE+YLDEKTIFHLNP
Sbjct:   42 KVACETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNP 237
[Close]
BLAST of CF832708 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 1.673e-101
Identity = 175/196 (89.29%), Postives = 186/196 (94.90%), Query Frame = 3 
Query:    6 QVACETCTKTNPFMVFGEITTKAKVHYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 593
            +VACETCTKTN  MVFGEITTKA V YEKIVR+TCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA+LTEVRKN TC WLRPDGKTQVT+EY+ND GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIPEKYLDEKTIFHLNP
Sbjct:   41 KVACETCTKTNMVMVFGEITTKANVDYEKIVRNTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYFNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPEKYLDEKTIFHLNP 236
The following BLAST results are available for this feature:
BLAST of CF832708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DENCR3.371e-10290.31S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK1_TRIMO3.371e-10291.84S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK2_SUASA4.403e-10290.31S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK5_POPTR5.750e-10290.82S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK3_ACTCH7.510e-10289.29S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK2_POPTR7.510e-10291.33S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK3_ATRNU9.808e-10290.82S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK1_ORYSJ1.281e-10190.82S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI1.281e-10190.82S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK_MEDFA1.673e-10189.29S-adenosylmethionine synthetase OS=Medicago falcat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832708 ID=CF832708; Name=CF832708; organism=Citrus sinensis; type=EST; length=595bp
GAGAGCAGGTTGCCTGTGAGACATGCACCAAGACCAACCCCTTCATGGTC
TTTGGAGAGATTACCACCAAGGCCAAGGTACACTATGAGAAGATTGTTCG
CGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACG
CCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATT
GCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGC
TGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAAT
TTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACG
GAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGAC
CCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGTCCCAGTCC
GTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAAT
GATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCC
CGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATC
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