CF832710

Overview
NameCF832710
Unique NameCF832710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2005 contig Csv1_Contig2005:102..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832710 vs. ExPASy Swiss-Prot
Match: ATG8_NEOFI (Autophagy-related protein 8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43
Identity = 87/112 (77.68%), Postives = 94/112 (83.93%), Query Frame = 1 
Query:    4 FKQELDLEKRRA*AARIMEKYPDRIPVIVEKAHRSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEQKKDEDGFLYVTYRGENTFG 339
            FK E   EKR+A A RI +KY DRIPVI EK  +SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYE+ KDEDGFLY+TY GENTFG
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CF832710 vs. ExPASy Swiss-Prot
Match: ATG8_COLLN (Autophagy-related protein 8 OS=Colletotrichum lindemuthianum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43
Identity = 87/112 (77.68%), Postives = 94/112 (83.93%), Query Frame = 1 
Query:    4 FKQELDLEKRRA*AARIMEKYPDRIPVIVEKAHRSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEQKKDEDGFLYVTYRGENTFG 339
            FK E   EKR+A A RI +KY DRIPVI EK  +SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYE+ KDEDGFLY+TY GENTFG
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CF832710 vs. ExPASy Swiss-Prot
Match: ATG8_ASPTN (Autophagy-related protein 8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43
Identity = 87/112 (77.68%), Postives = 94/112 (83.93%), Query Frame = 1 
Query:    4 FKQELDLEKRRA*AARIMEKYPDRIPVIVEKAHRSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEQKKDEDGFLYVTYRGENTFG 339
            FK E   EKR+A A RI +KY DRIPVI EK  +SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYE+ KDEDGFLY+TY GENTFG
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CF832710 vs. ExPASy Swiss-Prot
Match: ATG8_ASPOR (Autophagy-related protein 8 OS=Aspergillus oryzae GN=atg8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43
Identity = 87/112 (77.68%), Postives = 94/112 (83.93%), Query Frame = 1 
Query:    4 FKQELDLEKRRA*AARIMEKYPDRIPVIVEKAHRSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEQKKDEDGFLYVTYRGENTFG 339
            FK E   EKR+A A RI +KY DRIPVI EK  +SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYE+ KDEDGFLY+TY GENTFG
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CF832710 vs. ExPASy Swiss-Prot
Match: ATG8_ASPNC (Autophagy-related protein 8 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43
Identity = 87/112 (77.68%), Postives = 94/112 (83.93%), Query Frame = 1 
Query:    4 FKQELDLEKRRA*AARIMEKYPDRIPVIVEKAHRSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEQKKDEDGFLYVTYRGENTFG 339
            FK E   EKR+A A RI +KY DRIPVI EK  +SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYE+ KDEDGFLY+TY GENTFG
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CF832710 vs. ExPASy Swiss-Prot
Match: ATG8_ASPFU (Autophagy-related protein 8 OS=Aspergillus fumigatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43
Identity = 87/112 (77.68%), Postives = 94/112 (83.93%), Query Frame = 1 
Query:    4 FKQELDLEKRRA*AARIMEKYPDRIPVIVEKAHRSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEQKKDEDGFLYVTYRGENTFG 339
            FK E   EKR+A A RI +KY DRIPVI EK  +SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYE+ KDEDGFLY+TY GENTFG
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CF832710 vs. ExPASy Swiss-Prot
Match: ATG8_ASPCL (Autophagy-related protein 8 OS=Aspergillus clavatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43
Identity = 87/112 (77.68%), Postives = 94/112 (83.93%), Query Frame = 1 
Query:    4 FKQELDLEKRRA*AARIMEKYPDRIPVIVEKAHRSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEQKKDEDGFLYVTYRGENTFG 339
            FK E   EKR+A A RI +KY DRIPVI EK  +SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYE+ KDEDGFLY+TY GENTFG
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CF832710 vs. ExPASy Swiss-Prot
Match: ATG8_COCIM (Autophagy-related protein 8 OS=Coccidioides immitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.950e-43
Identity = 86/113 (76.11%), Postives = 95/113 (84.07%), Query Frame = 1 
Query:    4 FKQELDLEKRRA*AARIMEKYPDRIPVIVEKAHRSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEQKKDEDGFLYVTYRGENTFGS 342
            FK E   EKR+A A RI +KY DRIPVI EK  +SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYE+ KD+DGFLY+TY GENTFG+
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDDDGFLYITYSGENTFGN 117
[Close]
BLAST of CF832710 vs. ExPASy Swiss-Prot
Match: ATG8_CHAGB (Autophagy-related protein 8 OS=Chaetomium globosum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.950e-43
Identity = 86/113 (76.11%), Postives = 95/113 (84.07%), Query Frame = 1 
Query:    4 FKQELDLEKRRA*AARIMEKYPDRIPVIVEKAHRSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEQKKDEDGFLYVTYRGENTFGS 342
            FK E   EKR+A A RI +KY DRIPVI EK  +SDI  IDKKKYLVP+DLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYE+ KDEDGFLY+TY GENTFG+
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGN 117
[Close]
BLAST of CF832710 vs. ExPASy Swiss-Prot
Match: ATG8_EMENI (Autophagy-related protein 8 OS=Emericella nidulans GN=atg8 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.038e-42
Identity = 87/112 (77.68%), Postives = 93/112 (83.04%), Query Frame = 1 
Query:    4 FKQELDLEKRRA*AARIMEKYPDRIPVIVEKAHRSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEQKKDEDGFLYVTYRGENTFG 339
            FK E   EKR+A A RI  KY DRIPVI EK  +SDI  IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IYE+ KDEDGFLY+TY GENTFG
Sbjct:    5 FKDEHPFEKRKAEAERIRAKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
The following BLAST results are available for this feature:
BLAST of CF832710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_NEOFI4.661e-4377.68Autophagy-related protein 8 OS=Neosartorya fischer... [more]
ATG8_COLLN4.661e-4377.68Autophagy-related protein 8 OS=Colletotrichum lind... [more]
ATG8_ASPTN4.661e-4377.68Autophagy-related protein 8 OS=Aspergillus terreus... [more]
ATG8_ASPOR4.661e-4377.68Autophagy-related protein 8 OS=Aspergillus oryzae ... [more]
ATG8_ASPNC4.661e-4377.68Autophagy-related protein 8 OS=Aspergillus niger (... [more]
ATG8_ASPFU4.661e-4377.68Autophagy-related protein 8 OS=Aspergillus fumigat... [more]
ATG8_ASPCL4.661e-4377.68Autophagy-related protein 8 OS=Aspergillus clavatu... [more]
ATG8_COCIM7.950e-4376.11Autophagy-related protein 8 OS=Coccidioides immiti... [more]
ATG8_CHAGB7.950e-4376.11Autophagy-related protein 8 OS=Chaetomium globosum... [more]
ATG8_EMENI1.038e-4277.68Autophagy-related protein 8 OS=Emericella nidulans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832710 ID=CF832710; Name=CF832710; organism=Citrus sinensis; type=EST; length=683bp
TACTTCAAGCAAGAGCTTGATCTTGAGAAGAGACGCGCATAGGCTGCAAG
GATTATGGAGAAGTACCCTGACAGGATTCCGGTGATTGTGGAGAAGGCAC
ATAGAAGTGACATACCAAATATAGATAAGAAGAAGTATCTTGTTCCAGCT
GACCTGACTGTAGGACAATTTGTCTATGTCATCCGTAAAAGGATCAAACT
GAGTGCTGAAAAGGCGATATTTATTTTTGTGGATAATGTGCTCCCACCTA
CAGGTGCTATTATGTCTGCCATATACGAACAGAAAAAGGATGAAGATGGT
TTTCTTTATGTGACTTACAGGGGGGAGAACACATTTGGAAGCCACGTCCC
AGTTTACCCTTGTGATTATCTATCTGCTCATTGTGTGGTTTCTTGTGCGA
CCGCATTTTTATCTCAATTGTCATCCTTGCTTTCCGCTGAATATTCCTTT
ATCGGGCATATTTTATATTTTATAAAGACATTGCCAGTGATAATATGTAC
AGTTACCTATTGTATATAATTCTTACAGGCATAATATGTCAAGTTTCTTT
CTTGCCTTTCTATTTTGATGATTTTTTTTCGGTTAGGGTATTTGCTGCTG
GTTTCGATCTGTAATCTTTATCACGAAATACTTGACTTGGAACCCGGATT
CTGCGTGTTTGTGAGCCATTGCTATTTTTAAGA
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