CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACLD (Xylose isomerase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=xylA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = -3 Query: 303 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQE 704 G+IDAN GD +GWDTD+F TD+ A L M ++K GG GG NFDAK+RR S EDLF AHI GMDT A GL+ A++L+ED +L +++ +RY+S+ IG +I+ G+ D + L A+E + S +QE Sbjct: 291 GSIDANQGDLLLGWDTDEFPTDLYSAVLAMYEILKAGGFKTGGINFDAKVRRPSFADEDLFHAHIAGMDTYAVGLKVASRLLEDKALDQVIEERYESYTKGIGLEIKEGRTDLKKLAAYALENDHIENQSGRQE 424
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ENTS8 (Xylose isomerase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=xylA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29 Identity = 64/138 (46.38%), Postives = 88/138 (63.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GDPQ+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AAK++E+G L + V +RY ++ E+GQ+I G+ L + A + P+ S QE E Sbjct: 293 GSVDANRGDPQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKVAAKMLEEGELDKRVARRYAGWNGELGQQILKGQMTLAELAQYAEQHNLAPQHQSGHQEQLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_LACLA (Xylose isomerase OS=Lactococcus lactis subsp. lactis GN=xylA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29 Identity = 66/126 (52.38%), Postives = 87/126 (69.05%), Query Frame = -3 Query: 330 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSF-DSEIGQKIEAGKADFEMLEKKAMEWGE 704 G+IDAN G+ +GWDTD+F T + + TL M ++ NGGL GG NFDAK+RR S EDL +AHI GMDT AR L+ AA +IED L ++V +RY S+ ++E+GQ IE G A FE L A+E G+ Sbjct: 293 GSIDANQGNYLLGWDTDEFPTLVIDITLAMHQILLNGGLGKGGINFDAKVRRTSFKAEDLILAHIAGMDTYARALKGAAAIIEDKFLSDIVDERYTSYKNTEVGQSIENGTATFESLAAFALEHGD 418
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BURTA (Xylose isomerase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=xylA PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29 Identity = 68/145 (46.90%), Postives = 87/145 (60.00%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G++DAN GDPQ GWDTDQF + E TL ++++GG GG NFDAK+RR+S D EDLF HI +D +A L AA L+E+ L L R+RY +DSE G+KI AG + L A+ G P+ S QE E I AI Sbjct: 292 GSVDANRGDPQNGWDTDQFPNSVEELTLAFYEILRHGGFTTGGMNFDAKVRRQSVDPEDLFHGHIGAIDVLALALERAAVLVENDRLDALRRRRYAQWDSEFGRKILAGGYSLQSLAADALARGVNPQHASGAQERLENIVNQAI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALTY (Xylose isomerase OS=Salmonella typhimurium GN=xylA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 65/138 (47.10%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++ E+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALSV (Xylose isomerase OS=Salmonella schwarzengrund (strain CVM19633) GN=xylA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 65/138 (47.10%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++ E+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALPC (Xylose isomerase OS=Salmonella paratyphi C (strain RKS4594) GN=xylA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 65/138 (47.10%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++ E+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALPB (Xylose isomerase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=xylA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 65/138 (47.10%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++ E+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALNS (Xylose isomerase OS=Salmonella newport (strain SL254) GN=xylA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 65/138 (47.10%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++ E+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALHS (Xylose isomerase OS=Salmonella heidelberg (strain SL476) GN=xylA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 65/138 (47.10%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++ E+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |