CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALCH (Xylose isomerase OS=Salmonella choleraesuis GN=xylA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 65/138 (47.10%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++ E+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALA4 (Xylose isomerase OS=Salmonella agona (strain SL483) GN=xylA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 65/138 (47.10%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++ E+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA1_XANAC (Xylose isomerase 1 OS=Xanthomonas axonopodis pv. citri GN=xylA1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 70/137 (51.09%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAE 704 G+IDAN G+ Q GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ L + +RY SFDS G AGK L K A P+ S +QE E Sbjct: 297 GSIDANRGNAQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALLTASPLEQWRAERYASFDSGAGADFAAGKTTLADLAKHA-AGNAPQQISGRQEAYE 432
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALTI (Xylose isomerase OS=Salmonella typhi GN=xylA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28 Identity = 64/138 (46.38%), Postives = 86/138 (62.32%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADF-EMLEKKAMEWGEPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++ E+GQ+I G+ E+ + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQILKGQLSLGELAQYAEQHHLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_KLEPN (Xylose isomerase OS=Klebsiella pneumoniae GN=xylA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28 Identity = 64/138 (46.38%), Postives = 88/138 (63.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADF-EMLEKKAMEWGEPKVPSAKQELAE 704 G++DAN GDPQ+GWDTDQF + E L+M + K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA++IEDG L + V +RY ++ E+GQ+I G+ ++ + A P+ S +QE E Sbjct: 293 GSVDANRGDPQLGWDTDQFPNRVEEDALVMYEIFKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMAVSLKVAARMIEDGELDKRVARRYAGWNGELGQQILNGQMTLSDIAQYAAQHQLAPQHRSGQQEQLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BURXL (Xylose isomerase OS=Burkholderia xenovorans (strain LB400) GN=xylA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 65/145 (44.83%), Postives = 87/145 (60.00%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G++DAN GDPQ GWDTDQF + E TL ++K+GG GG NFD+K+RR+S D EDLF HI +D +A + AA LIE+ L + R+RY +D++ G+KI +G L A+ G P+ S QEL E I AI Sbjct: 292 GSVDANRGDPQNGWDTDQFPNSVEELTLAFYEILKHGGFTTGGMNFDSKVRRQSVDPEDLFYGHIGAIDNLALAVERAAVLIENDRLDQFKRQRYAGWDADFGRKILSGDYSLSTLATDALARGLNPQHASGHQELMENIVNQAI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BURA4 (Xylose isomerase OS=Burkholderia ambifaria (strain MC40-6) GN=xylA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 65/145 (44.83%), Postives = 87/145 (60.00%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G++DAN GDPQ GWDTDQF + E TL ++++GG GG NFDAK+RR+S D EDLF H+ +D +A L AA L+E+ L L R+RY +D GQKI +G + L + A+ G +P+ S QE E I AI Sbjct: 292 GSVDANRGDPQNGWDTDQFPNSVEELTLAFYEILRHGGFTTGGMNFDAKVRRQSVDPEDLFYGHVGAIDVLALALERAAVLVENDRLDALRRQRYAQWDDAFGQKILSGGYTLQSLAEDALARGVDPRHASGAQERLENIVNQAI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_STAXY (Xylose isomerase OS=Staphylococcus xylosus GN=xylA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.495e-28 Identity = 62/120 (51.67%), Postives = 81/120 (67.50%), Query Frame = -3 Query: 345 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKA 704 G++DAN G P +GWDTD+ TD+ + TL M ++KNGGLAPGG NFDAK RR S EDL + HI GMDT A GLR A K+IED ++ ++Y+SF+ IG+KI G+ + LE A Sbjct: 290 GSVDANQGHPLLGWDTDES-TDVYDTTLAMYEILKNGGLAPGGLNFDAKPRRTSFKQEDLILTHIAGMDTFALGLRVAYKMIEDNFFENIMDEKYKSFNEGIGKKIVEGETSLKELEDYA 408
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BURCM (Xylose isomerase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=xylA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.871e-28 Identity = 65/145 (44.83%), Postives = 86/145 (59.31%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G++DAN GDPQ GWDTDQF + E TL ++++GG GG NFDAK+RR+S D EDLF H+ +D +A L AA L+E+ L L R+RY +D GQKI +G + L A+ G +P+ S QE E I AI Sbjct: 292 GSVDANRGDPQNGWDTDQFPNSVEELTLAFYEILRHGGFTTGGMNFDAKVRRQSVDPEDLFYGHVGAIDVLALALERAAVLVENDRLDALRRQRYAQWDDAFGQKILSGGYTLQSLADDALARGVDPRHASGAQERLENIVNQAI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BURCJ (Xylose isomerase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=xylA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.871e-28 Identity = 66/145 (45.52%), Postives = 86/145 (59.31%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G++DAN GDPQ GWDTDQF + E TL ++++GG GG NFDAK+RR+S D EDLF H+ +D +A L AA L+E+ L L R+RY +D G+KI AG E L A+ G +P+ S QE E I AI Sbjct: 292 GSVDANRGDPQNGWDTDQFPNSVEELTLAFYEILRHGGFTTGGMNFDAKVRRQSIDPEDLFYGHVGAIDVLALALERAAVLVENDRLDALRRQRYAQWDDAFGRKILAGGYTLESLAADALARGVDPQHASGAQERLENIVNQAI 436 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |