CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_MESSB (Xylose isomerase OS=Mesorhizobium sp. (strain BNC1) GN=xylA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24 Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEML-EKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF + EA L +++ GG GG NFDAKLRR+S D EDL AHI GMD A+GL+ AA++IED +L + +RY +++ Q + G+ E + E+ A E +PK S +QE E I Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNAPEAALAYYYILQAGGFTTGGTNFDAKLRRQSLDPEDLVAAHIGGMDICAQGLKAAARMIEDKALSGPLEERYSGWNATEAQAMLKGERSLEAIAERVARENLDPKPRSGRQEKLENI 431
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BRUO2 (Xylose isomerase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=xylA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24 Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D +DL I HI GMD ARGL+ +A+++EDG+L + + +RY ++ E G+++ +G + ++ + + P+ S +QE E I Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKASARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPKSGRQEYLENI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_AGRT5 (Xylose isomerase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=xylA PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24 Identity = 57/114 (50.00%), Postives = 73/114 (64.04%), Query Frame = -3 Query: 363 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFE 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFD+KLRR+S D +DL I HI GMD ARGL+ AAK+IEDG+L + + +RY +DS QK+ G+ E Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYHVLAGGGFKNGGTNFDSKLRRQSLDPQDLLIGHIGGMDCCARGLKAAAKMIEDGALSKPLSERYAKWDSPEAQKMLRGELKLE 405
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_OCHA4 (Xylose isomerase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=xylA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24 Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D +DL I HI GMD ARGL+ AA ++EDG+L + + +RY ++ + G+K+ G + ++ + + P+ S +QE E + Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAAAMLEDGALSKPLDERYAGWNGDFGKKLLTGLSLDQITAEVETKDINPQPKSGRQEYLENV 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHIEC (Xylose isomerase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=xylA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 63/144 (43.75%), Postives = 82/144 (56.94%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGE-----PKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFD+KLRR+S D DL I HI GMD ARGL+ AAK+IED +L + + RY ++S QK+ G+ + + W E P+ S KQEL E + Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYHVLAGGGFKTGGTNFDSKLRRQSLDPADLLIGHIGGMDCCARGLKAAAKMIEDKALSQPLADRYAGWESVEAQKLFRGEYSLD----EIANWVESKDVNPQPKSGKQELLENV 431
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_PSEU2 (Xylose isomerase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=xylA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 58/138 (42.03%), Postives = 78/138 (56.52%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAM-EWGEPKVPSAKQELAE 704 G+IDAN GDPQ GWDTDQF + E TL ++K GG GGFNFD+K+RR+S D DLF H+ MD +A L AA ++++ L +RY + GQ + AG+ L + A P+ S +QEL E Sbjct: 292 GSIDANRGDPQNGWDTDQFPNSVEEMTLATYEILKAGGFTNGGFNFDSKVRRQSLDDIDLFHGHVAAMDVLALALERAAAMLQNDKLQHFKDQRYAGWQQPFGQSVLAGEFSLASLAEHAFANELNPQAVSGRQELLE 429
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_PSEFS (Xylose isomerase OS=Pseudomonas fluorescens (strain SBW25) GN=xylA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G+IDAN GDPQ GWDTDQF + E TL ++K GG GG+NFD+K+RR+S D DLF H+ MD +A L AA ++++ L + +RY + +GQ + AG+ L + A P+ S +QE+ E Sbjct: 292 GSIDANRGDPQNGWDTDQFPNSVEEMTLATYEILKAGGFKNGGYNFDSKVRRQSLDDVDLFHGHVAAMDVLALALERAAAMVQNDRLQQFKDQRYAGWQQPLGQAVLAGEFSLASLAEHAFAHELNPQAVSGRQEMLE 429
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHIME (Xylose isomerase OS=Rhizobium meliloti GN=xylA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.717e-24 Identity = 62/140 (44.29%), Postives = 81/140 (57.86%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D EDL I HI GMD ARGL+ AAK+IED +L + RY ++ +K+ G E +E ++ P+ S +QEL E + Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYHVLAGGGFKTGGTNFDAKLRRQSIDPEDLLIGHIGGMDCCARGLKAAAKMIEDKALSAPLEARYAGWNVPEAKKMLDGGFSLEEIEAWVLKSDVNPQPKSGRQELLENV 431
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHIL3 (Xylose isomerase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=xylA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24 Identity = 61/140 (43.57%), Postives = 80/140 (57.14%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFD+KLRR+S D DL I HI GMD ARGL+ AAK+IED +L + + RY ++S QK+ G+ + + P+ S KQEL E + Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYHVLAGGGFKTGGTNFDSKLRRQSLDPADLLIGHIGGMDCCARGLKAAAKMIEDKALSQPLADRYAGWESAEAQKLFRGEYSLDEITHYVESHDVNPQPRSGKQELLENV 431
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHILW (Xylose isomerase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=xylA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.146e-23 Identity = 62/144 (43.06%), Postives = 82/144 (56.94%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGE-----PKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFD+KLRR+S D DL I HI GMD ARGL+ AA++IED +L + + RY ++S QK+ G+ + + W E P+ S KQEL E + Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYHVLAGGGFKTGGTNFDSKLRRQSLDPADLLIGHIGGMDCCARGLKAAARMIEDKALSQPLADRYAGWESAEAQKLFRGEYSLD----EITNWVETKDVNPQPRSGKQELLENV 431 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |