CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_PSESM (Xylose isomerase OS=Pseudomonas syringae pv. tomato GN=xylA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23 Identity = 56/138 (40.58%), Postives = 78/138 (56.52%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAM-EWGEPKVPSAKQELAE 704 G+IDAN GDPQ GWDTDQF + E TL ++K GG GG+NFD+K+RR+S D DLF H+ MD +A L AA ++++ L + +RY + GQ + +G L + A P+ S +QEL E Sbjct: 292 GSIDANRGDPQNGWDTDQFPNSVEEMTLATYEILKAGGFTHGGYNFDSKVRRQSLDDVDLFHGHVAAMDVLALSLERAAAMVQNDKLQQFKDQRYAGWQQPFGQSVLSGGFSLASLAEHAFANELNPQAVSGRQELLE 429
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BIFLO (Xylose isomerase OS=Bifidobacterium longum GN=xylA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23 Identity = 56/123 (45.53%), Postives = 76/123 (61.79%), Query Frame = -3 Query: 339 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAP-GGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAME 704 G++DAN GD +GWD D+F TD+ E +M V++ G + P GG NFDAK RR S EDLF +HI GMD A GL A K+ +DG + L +RY S+DS IG+ I+ G LE +++ Sbjct: 293 GSLDANQGDKLIGWDMDEFPTDLYETVAVMWEVLQAGSIGPHGGLNFDAKPRRTSFYEEDLFRSHIAGMDAYAAGLLVADKMNQDGFIQNLQAERYSSYDSGIGKDIDEGNVTLADLEAYSLD 415
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHOSK (Xylose isomerase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=xylA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23 Identity = 61/141 (43.26%), Postives = 83/141 (58.87%), Query Frame = -3 Query: 285 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIF 704 G+ID N D Q GWDTDQF + E L +++ GG GG NFDAK+RR+S D EDL +AH+ GMDT AR L+ AA+L EDGSL RY +++ Q + A + E +E + + G PK S +QE E ++ Sbjct: 291 GSIDMNRNDYQSGWDTDQFPHNHPEMALAYYEILRAGGFTTGGTNFDAKIRRQSLDPEDLVLAHVGGMDTCARALKAAARLYEDGSLETARAARYAGWETPEAQAMLA--SSLEEIEARVLAEGINPKPRSGRQERLENLW 429
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHISN (Xylose isomerase OS=Rhizobium sp. (strain NGR234) GN=xylA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23 Identity = 63/142 (44.37%), Postives = 83/142 (58.45%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLE---KKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D EDL I HI GMD ARGL+ AAK++ED +L + KRY ++ +K+ G + +E +KA +PK S +QE E + Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYHHVLSGGGFKTGGTNFDAKLRRQSIDPEDLLIGHIGGMDCCARGLKAAAKMVEDKALSGPLEKRYAGWNVPEAKKMLDGGFSLDEIEAWVRKADLNPQPK--SGRQEYLENV 431
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALPA (Xylose isomerase OS=Salmonella paratyphi A GN=xylA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = -3 Query: 426 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRK 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + + K Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELGQQILK 385
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHOS4 (Xylose isomerase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=xylA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = -3 Query: 285 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIF 704 G+ID N D Q GWDTDQF + E L +++ GG GG NFDAK+RR+S D EDL +AH+ GMDT AR L+ AA+L EDGSL RY +++ Q + A + E +E + + G P+ S +QE E ++ Sbjct: 291 GSIDMNRNDYQSGWDTDQFPHNHPEMALAYYEILRAGGFTTGGTNFDAKIRRQSLDPEDLVLAHVGGMDTCARALKAAARLYEDGSLETARAARYAGWETPEAQAMLA--SSLEKIEARVLAEGINPEPRSGRQERLENLW 429
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHOS1 (Xylose isomerase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=xylA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23 Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = -3 Query: 285 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIF 704 G+ID N D Q GWDTDQF + E L +++ GG GG NFDAK+RR+S D EDL +AH+ GMDT AR L+ AA+L EDGSL RY +++ Q + A + E +E + + G P+ S +QE E ++ Sbjct: 291 GSIDMNRNDYQSGWDTDQFPHNHPEMALAYYEILRAGGFTTGGTNFDAKIRRQSLDPEDLVLAHVGGMDTCARALKAAARLYEDGSLEAARAARYAGWETPEAQAMLA--SSLEEIEARVLAEGINPEPRSGRQERLENLW 429
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_AGRVS (Xylose isomerase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=xylA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22 Identity = 60/140 (42.86%), Postives = 80/140 (57.14%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAM-EWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V++ GG GG NFD+KLRR+S D DL I HI GMD ARGL+ AAK++ED +L + RY ++S+ G K E + + E P+ S +QEL E + Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLQAGGFTSGGTNFDSKLRRQSIDPADLLIGHIGGMDCCARGLKAAAKMVEDKALSGPLANRYAGWNSD-GAKAMLASGTLESIAARVEGENINPQPVSGQQELLENV 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ROSDO (Xylose isomerase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=xylA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = -3 Query: 387 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKI 704 G+ID N D Q GWDTDQF ++ E L V++ GG GG NFDAKLRR+S D DL +AH+ GMD A GL+ AA ++EDG L RY + +GQK+ Sbjct: 291 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYEVLRAGGFDTGGTNFDAKLRRQSLDPADLILAHVGGMDACAAGLKAAAAMLEDGKLEAAREARYAGWSEGLGQKL 396
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHOS5 (Xylose isomerase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=xylA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 58/140 (41.43%), Postives = 81/140 (57.86%), Query Frame = -3 Query: 285 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIF 704 G+ID N D Q GWDTDQF + E L V++ GG GG NFDAK+RR+S D EDL +AH+ GMDT AR L+ AA+L EDGSL RY +++ + + + + E+ + E P+ S +QE E ++ Sbjct: 291 GSIDMNRNDYQSGWDTDQFPNNHPEMALAYYEVLRAGGFTTGGTNFDAKIRRQSLDPEDLILAHVGGMDTCARALKAAARLYEDGSLERARADRYAGWETPEAKAMLSSSLE-EIEARVLAEDINPQPRSGRQERLENLW 429 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |